Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1694 ATGCTTCCTTGTTCCTTGAGTCAATTAAAGAACCTTTCCACCCTGCGCTTGCATGTGAATGAGATCTATGGATCTATTCCTTTATGTGTGGGTCACATGACCAATCTCAAAAGAATCCAGCTTTCTGATAATAAACTTTATGGCCAGTTACCTATCAAGCTTCAAAATCTCACTCTACTCAATTATCTAGATTTGAGTTTAAACAAGCTTGCCGGATCCATTCCTTCATCTTTGGGTTTTTTAACTTCCCTCTCCTATCTGAATCTGTCATCAAATATGTTCACTGGCAAAATCCCTTCTTCAATCTCAAATTTGGCATATTTAGAGGTGCTTGATGTTTCCCAAAATCAAATAAGTGGTTTCATACCCAAACGTGCTATTCAAAACCTAGGAAATTTGAAAACTTTAGATCTGTCAAAGAACAAGATATGTGGTAACATACCAAAAGAGATTGGACATCTCTATAGCCTTCAAACTCTAGATCTCTCCCAAAATAAGCTGATTGGTAATATGCCATTCTTTCACAACCAGCTTTATTTTATTGGTAACTTTAGTCACAACGACATTAATGGAGAGCTATCATCTAGCTTATGCCTTTACCCAGCAAGTTGTCGCCTTGATTTGAGTCACAACAAAATCACTGGCAGCATACATAAAGAACTTGTCAAGATGCAATACATCAACTTGGCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAGTTTATAGCTTCTTCCCTCATGACATATTCAAGGGTAATAAAGAATTACTTTGTCCAGATCAGGAGATTTGGTTTTCTTCGTCAAAAAGTAAAAAGTCTTCTTTGACGTTCATTCTTCCTATGACAATTGCTTCTGCCTCCATATCCATCTTGGGTTTCATCCTTTTAGTATGGTCCATCCAAAAAAACAAGAAACCCAAAATCAAGAGAAACGTGATAAAAAATGGAGATTTGTTTTCAATATTGAATTTTGATGGCAAAATTGCATATGAAGACATTATTGAAGCAACTGAGGACTTTGATATCAAACATTGTATTGCAACTTGTGCATATGGAAGTGTTTATAAGGCACAACTTCCTAGTGGACGGATTGTGGCTGTGAAAAAACTTCATGAAAGAGTAATATCTGAAGACCCATCTTTTACTAAGAGTTTCAAAAATGAAGTACAAATGCTGACTGAAATTCGACATCGCAACATTGTAAAACTCCATGGTTTTTGTTTGCACAATCGTCACATGTTCCTCATCTATGAATACATGGAAAGGCGAAGCCTCTTTTATGTATTGAGTAACAATGATGAAGCAAAAGAATTGGACTGGAGTAAGAGGGTGAATACCATTAAAGGAATGGCCAATGCATTATTCTATATGCATCATGATTGTAGTCCTCCAATTATCCACCGTGACATAACAAGTAACAATGTATTATTCAACTCTAATATAGAGGCTTTTATCTCAGATTTTGGCACAGCTAGAATTCTTGATCTTGAGTCATCCAATCAAACTCTTTTAATTGGTACCTATGGTTATATTGCTCCAGAGCAAGCATATACCTTGGTCGTGACTGAAAAATGTGATGTCTATAGTTTTGTAGTAGTGGTATTAGAAATCATCATTGGAAAGCATCCTGGAGATTTGATATTGTATTTGTCAGAGGACAATACTGAAAGCATTTTCTTAAAGGATATCTTGGACCCACGTCTTCCACTTCCCTTGCGAAAAGATGCAAAAGATTTGATTCTTTCAATCACAGTAGCATTAGCGTGCCTACATCCCTCGTCAAAATCTCGACCATCAATGAAGCAAGTCACTCAAACTCTCTCGTTCTCCAAGTTGCAACTAGCCACTCCTTTCAATGGCATTTCATTCAAACATTTAATGAACCAAGACATATAA 1899 0.3644 MLPCSLSQLKNLSTLRLHVNEIYGSIPLCVGHMTNLKRIQLSDNKLYGQLPIKLQNLTLLNYLDLSLNKLAGSIPSSLGFLTSLSYLNLSSNMFTGKIPSSISNLAYLEVLDVSQNQISGFIPKRAIQNLGNLKTLDLSKNKICGNIPKEIGHLYSLQTLDLSQNKLIGNMPFFHNQLYFIGNFSHNDINGELSSSLCLYPASCRLDLSHNKITGSIHKELVKMQYINLAYNLLSGYVPSEVYSFFPHDIFKGNKELLCPDQEIWFSSSKSKKSSLTFILPMTIASASISILGFILLVWSIQKNKKPKIKRNVIKNGDLFSILNFDGKIAYEDIIEATEDFDIKHCIATCAYGSVYKAQLPSGRIVAVKKLHERVISEDPSFTKSFKNEVQMLTEIRHRNIVKLHGFCLHNRHMFLIYEYMERRSLFYVLSNNDEAKELDWSKRVNTIKGMANALFYMHHDCSPPIIHRDITSNNVLFNSNIEAFISDFGTARILDLESSNQTLLIGTYGYIAPEQAYTLVVTEKCDVYSFVVVVLEIIIGKHPGDLILYLSEDNTESIFLKDILDPRLPLPLRKDAKDLILSITVALACLHPSSKSRPSMKQVTQTLSFSKLQLATPFNGISFKHLMNQDI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1694 632 FunFam Leucine-rich repeat receptor-like protein kinase 421 617 - -
Prci12g1694 632 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Prci12g1694 632 Gene3D Transferase(Phosphotransferase) domain 1 421 617 - -
Prci12g1694 632 PANTHER LEUCINE RICH REPEAT KINASE 2 2 616 - -
Prci12g1694 632 Pfam Protein kinase domain 351 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1694 632 SUPERFAMILY L domain-like 3 243 - -
Prci12g1694 632 PRINTS Leucine-rich repeat signature 154 167 - -
Prci12g1694 632 PRINTS Leucine-rich repeat signature 60 73 - -
Prci12g1694 632 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 101 193 - -
Prci12g1694 632 Pfam Leucine Rich Repeat 83 105 IPR001611 GO:0005515
Prci12g1694 632 ProSitePatterns Tyrosine protein kinases specific active-site signature. 466 478 IPR008266 GO:0004672|GO:0006468
Prci12g1694 632 FunFam Leucine-rich repeat receptor protein kinase MSP1 303 420 - -
Prci12g1694 632 SUPERFAMILY Protein kinase-like (PK-like) 321 611 IPR011009 -
Prci12g1694 632 Gene3D Ribonuclease Inhibitor 1 263 IPR032675 -
Prci12g1694 632 ProSiteProfiles Protein kinase domain profile. 341 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1694 632 FunFam Leucine-rich repeat receptor protein kinase EMS1 2 100 - -
Prci12g1694 632 Gene3D Phosphorylase Kinase; domain 1 302 420 - -
Prci12g1694 632 ProSiteProfiles Leucine-rich repeat profile. 132 154 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1694 Prci-Chr12 34617132 34620072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1694 2 514 Receptor kinase-like Gene Family AT4G08850 41.055 1.96e-113 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1694 Pkinase 5.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1694 - - pcin:129305349 644.81