Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1687 ATGGAATGTAGAAGAAGGAGCTTTGCCCAGAGTCTCTGTTCATTGCCACCCGCTCCTATCCCTCTTGCAAGAAAGGTAGGAGCTGAGTTCATAGGCACTCTCATTCTCATGTTTGCAGGGACCGCCGCTGCAATAGTGAATCAGAAGACACAAGGCGCTGAGACTCTCATCGGATGCGCCGCCACCACTGGTCTTGCCGTCATGATCGTCATCCTCTCCACCGGCCACATCTCCGGCGCTCATCTCAACCCGGCGGTTACCATCTCCTTTGCTGCACTGAAGCATTTCCCATGGAAACATGTTCCGGTGTACATCGCAGCGCAAGTAATGGCGTCGATATGTGCAGCATTTGCACTGAAGGGAATATTTCATCCGTTCATGAATGGAGGAGTCACGGTTCCTTCAGGAGGATATGGCCAAGCCTTTGCTTTGGAGTTCATCATCAGTTTTAATCTCATGTTCGTCGTCACTGCCGTGGCCACCGACACAAGAGCCGTGGGAGAGCTTGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATCCTCATCGCCGGGCCAGCATCAGGAGGGTCAATGAACCCAGTAAGAACACTGGGCCCAGCAATAGCAGCAAATAACTATAGAGCCATTTGGGTGTATCTGATAGCTCCCATACTTGGAGCTTTGTGTGGAGCAGGCACTTATACTTTAGTGAAGCTTACTGATGAACAAGAAGAAGAGGCCAAGGCTACAATCACTTCAGCCCCTGGCAGCTTCAGAAGGTGA 768 0.5182 MECRRRSFAQSLCSLPPAPIPLARKVGAEFIGTLILMFAGTAAAIVNQKTQGAETLIGCAATTGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKHVPVYIAAQVMASICAAFALKGIFHPFMNGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPASGGSMNPVRTLGPAIAANNYRAIWVYLIAPILGALCGAGTYTLVKLTDEQEEEAKATITSAPGSFRR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1687 255 Gene3D Glycerol uptake facilitator protein. 17 246 IPR023271 -
Prci12g1687 255 SUPERFAMILY Aquaporin-like 21 238 IPR023271 -
Prci12g1687 255 CDD MIP 24 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g1687 255 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g1687 255 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g1687 255 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g1687 255 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g1687 255 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g1687 255 PRINTS Major intrinsic protein family signature 24 43 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g1687 255 FunFam Aquaporin NIP2-1 12 244 - -
Prci12g1687 255 PANTHER AQUAPORIN NIP2-1 17 238 IPR034294 -
Prci12g1687 255 Pfam Major intrinsic protein 22 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci12g1687 255 ProSitePatterns MIP family signature. 81 89 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1687 Prci-Chr12 34567086 34570393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1687 13 255 Major Intrinsic Protein MIP AT1G80760 81.070 3.13e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1687 K09874 - gmx:100815637 403.29