Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1684 ATGGATAGCCAAACAACAGACAAGACCCAGAAACAGACAGAAACAGAGGATCAACAGCAGCATCACCCACAACCTAGTTCATCTTCGTCATCCCCTCCTCGTCTTGTGTTGGATCTAACTCTCTCTAATCAATCCTCACAATCTGAATCTCCCCATGGCAGGATCTTCTCCTGCAACTACTGTGACAGAAAATTCTATTGCTCGCAGGCACTAGGAGGACACCAAAACGCGCACAAGCGTGAGAGAACTCTGGCAAAAAGAGGACACAACAACAACAACAACAACAACAACAACGTTGGAGATTATGCTTCACATGTTTCTGCAGATTTTGGACGAAGGTATTATCATTCATGTATGGCTTCTCTTCCTTTGCATGGCTTCTCCCATAACAGACCACTTGGGATTCAGGCCCATTCCATGATTCGCAAGCCTTCTTCTTCTTCTTCCTCCTCTTCTTCTTGTTTTCAACCACCACGTTTCCAGAAGCCTCCATTATTGTTATTCAGAGCCAACCATGCTTGGACTACAGAATCTGAATCATCATCTTCTTTAACTTCTGGGATTATTCCAAAGTTCTCTCCAAGGCCTGTCACAGAGGAACAGCATCAACTTGACTTGTCCCTCAGACTATGA 633 0.4455 MDSQTTDKTQKQTETEDQQQHHPQPSSSSSSPPRLVLDLTLSNQSSQSESPHGRIFSCNYCDRKFYCSQALGGHQNAHKRERTLAKRGHNNNNNNNNNVGDYASHVSADFGRRYYHSCMASLPLHGFSHNRPLGIQAHSMIRKPSSSSSSSSSCFQPPRFQKPPLLLFRANHAWTTESESSSSLTSGIIPKFSPRPVTEEQHQLDLSLRL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1684 210 MobiDBLite consensus disorder prediction 19 35 - -
Prci12g1684 210 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Prci12g1684 210 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 182 IPR044246 GO:0009788
Prci12g1684 210 Gene3D Classic Zinc Finger 29 111 - -
Prci12g1684 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Prci12g1684 210 MobiDBLite consensus disorder prediction 1 18 - -
Prci12g1684 210 SUPERFAMILY beta-beta-alpha zinc fingers 53 83 IPR036236 -
Prci12g1684 210 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1684 Prci-Chr12 34549013 34549988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1684 54 210 C2H2 Transcription Factor Family AT1G80730 41.916 3.48e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1684 - - pcin:129287570 355.525