Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1670 ATGACGGCCATGGAGGTTCTTAAGAATGAAGCTTATGTAGCTGGAGATGTAGGCACATCTTTGCGGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAATATAGAAAAGTTATCTGGCATGCTGGAGGGCTTTATATGGTCTCCCAGAGGAGGTGAAGGCAATGACCATTCTGATGATTGGGTTCATGAGGAGGGGCCACATTCTGATTTTACTGGACCAAACTCTGGATGCACAGCTTGTGTGGCAGTCATTCGAGGCAACCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCAAGGAAGGGCCAGGCACATAATTTATCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGAGAGAATTCTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAATTTGGCCAGAGCAATTGGAGACATGGAATTCAAGCAAAACAAGTTTTTACCTGCTGAAAAGCAGATCGTGACCGCTGATCCAGACATAACTTCTGTTGAACTTTGCGATGATGATGAATTTCTGGTAATAGCTTGTGACGGGATATGGGATTGCATGTCTAGCCAACAGCTTGTGGATTTTATACATTCACAGTTGAAGACGGAGGAAAAACTCTCGGCAGTTTGCGAGAAAGTATTTGATCGGTGCTTATCACCCACAGCCGGCGGCGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAGGCCTTCAAGTCCTGATGATTCCATTGTGGACAAGTCTCCATCATCAGCTCAACCATCCAAGGATGATGAGAGTTCAAATCACCCATCTAATGGCGAAAGAAGTTTAGACCAACCAGTCTAG 900 0.4478 MTAMEVLKNEAYVAGDVGTSLRKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGEGNDHSDDWVHEEGPHSDFTGPNSGCTACVAVIRGNRLVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERERILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHSQLKTEEKLSAVCEKVFDRCLSPTAGGEGCDNMTMILVQFKRPSSPDDSIVDKSPSSAQPSKDDESSNHPSNGERSLDQPV 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1670 299 ProSiteProfiles PPM-type phosphatase domain profile. 1 258 IPR001932 -
Prci12g1670 299 SUPERFAMILY PP2C-like 10 260 IPR036457 -
Prci12g1670 299 SMART PP2C_4 10 256 IPR001932 -
Prci12g1670 299 MobiDBLite consensus disorder prediction 261 299 - -
Prci12g1670 299 CDD PP2Cc 5 258 IPR001932 -
Prci12g1670 299 MobiDBLite consensus disorder prediction 267 299 - -
Prci12g1670 299 Gene3D - 2 259 IPR036457 -
Prci12g1670 299 Pfam Protein phosphatase 2C 72 243 IPR001932 -
Prci12g1670 299 PANTHER PROTEIN PHOSPHATASE 2C 19 257 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1670 Prci-Chr12 34388483 34394716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1670 5 267 PP2C-type Phosphatase Gene Family AT2G25070 75.373 1.15e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1670 K17499 - gmx:100499713 496.893