Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1669 ATGGCGTGCTACCATGGAAGATGCTGTAAAGCTGTTGCTAAATTTTGTGCCAAATATCTGCACCGACAGGTTCTTAAGAATGAAGCTTATGTAGCTGGAGATGTAGGCACATCTTTGCGGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAATATAGAAAAGTTATCTGGCATGCTGGAGGGCTTTATATGGTCTCCCAGAGGAGGTGAAGGCAATGACCATTCTGATGATTGGGTTCATGAGGAGGGGCCACATTCTGATTTTACTGGACCAAACTCTGGATGCACAGCTTGTGTGGCAGTCATTCGAGGCAACCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCAAGGAAGGGCCAGGCACATAATTTATCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGAGAGAATTCTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAATTTGGCCAGAGCAATTGGAGACATGGAATTCAAGCAAAACAAGTTTTTACCTGCTGAAAAGCAGATCGTGACCGCTGATCCAGACATAACTTCTGTTGAACTTTGCGATGATGATGAATTTCTGGTAATAGCTTGTGACGGGATATGGGATTGCATGTCTAGCCAACAGCTTGTGGATTTTATACATTCACAGTTGAAGACGGAGGAAAAACTCTCGGCAGTTTGCGAGAAAGTATTTGATCGGTGCTTATCACCCACAGCCGGCGGCGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAGGCCTTCAAGTCCTGATGATTCCATTGTGGACAAGTCTCCATCATCAGCTCAACCATCCAAGGATGATGAGAGTTCAAATCACCCATCTAATGGCGAAAGAAGTTTAGACCAACCAGTCTAG 954 0.4455 MACYHGRCCKAVAKFCAKYLHRQVLKNEAYVAGDVGTSLRKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGEGNDHSDDWVHEEGPHSDFTGPNSGCTACVAVIRGNRLVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERERILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHSQLKTEEKLSAVCEKVFDRCLSPTAGGEGCDNMTMILVQFKRPSSPDDSIVDKSPSSAQPSKDDESSNHPSNGERSLDQPV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1669 317 Gene3D - 1 277 IPR036457 -
Prci12g1669 317 Pfam Protein phosphatase 2C 90 261 IPR001932 -
Prci12g1669 317 CDD PP2Cc 5 276 IPR001932 -
Prci12g1669 317 ProSiteProfiles PPM-type phosphatase domain profile. 1 276 IPR001932 -
Prci12g1669 317 PANTHER PROTEIN PHOSPHATASE 2C 3 275 IPR015655 GO:0004722|GO:0006470
Prci12g1669 317 SMART PP2C_4 1 274 IPR001932 -
Prci12g1669 317 MobiDBLite consensus disorder prediction 279 317 - -
Prci12g1669 317 MobiDBLite consensus disorder prediction 285 317 - -
Prci12g1669 317 SUPERFAMILY PP2C-like 4 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1669 Prci-Chr12 34386911 34394716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1669 1 285 PP2C-type Phosphatase Gene Family AT2G25070 74.483 1.63e-165 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1669 K17499 - gmx:100776787 523.472