Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1665 ATGGGCATATACCTCAGCGCCCCGAAAACAGAGAAGGCCTCTGATGATGGTGAGAATGACAGTCTTCGCTACGGGTTGTCTTCCATGCAGGGATGGCGTGCTACCATGGAAGATGCTGTTCTTAAGAATGAAGCTTATGTAGCTGGAGATGTAGGCACATCTTTGCGGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAATATAGAAAAGTTATCTGGCATGCTGGAGGGCTTTATATGGTCTCCCAGAGGAGGTGAAGGCAATGACCATTCTGATGATTGGGTTCATGAGGAGGGGCCACATTCTGATTTTACTGGACCAAACTCTGGATGCACAGCTTGTGTGGCAGTCATTCGAGGCAACCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCAAGGAAGGGCCAGGCACATAATTTATCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGAGAGAATTCTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAATTTGGCCAGAGCAATTGGAGACATGGAATTCAAGCAAAACAAGTTTTTACCTGCTGAAAAGCAGATCGTGACCGCTGATCCAGACATAACTTCTGTTGAACTTTGCGATGATGATGAATTTCTGGTAATAGCTTGTGACGGGATATGGGATTGCATGTCTAGCCAACAGCTTGTGGATTTTATACATTCACAGTTGAAGACGGAGGAAAAACTCTCGGCAGTTTGCGAGAAAGTATTTGATCGGTGCTTATCACCCACAGCCGGCGGCGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAGGCCTTCAAGTCCTGATGATTCCATTGTGGACAAGTCTCCATCATCAGCTCAACCATCCAAGGATGATGAGAGTTCAAATCACCCATCTAATGGCGAAAGAAGTTTAGACCAACCAGTCTAG 1002 0.4551 MGIYLSAPKTEKASDDGENDSLRYGLSSMQGWRATMEDAVLKNEAYVAGDVGTSLRKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGEGNDHSDDWVHEEGPHSDFTGPNSGCTACVAVIRGNRLVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERERILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHSQLKTEEKLSAVCEKVFDRCLSPTAGGEGCDNMTMILVQFKRPSSPDDSIVDKSPSSAQPSKDDESSNHPSNGERSLDQPV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1665 333 ProSiteProfiles PPM-type phosphatase domain profile. 23 292 IPR001932 -
Prci12g1665 333 SUPERFAMILY PP2C-like 3 294 IPR036457 -
Prci12g1665 333 MobiDBLite consensus disorder prediction 295 333 - -
Prci12g1665 333 CDD PP2Cc 23 292 IPR001932 -
Prci12g1665 333 MobiDBLite consensus disorder prediction 301 333 - -
Prci12g1665 333 Pfam Protein phosphatase 2C 23 277 IPR001932 -
Prci12g1665 333 PANTHER PROTEIN PHOSPHATASE 2C 52 291 IPR015655 GO:0004722|GO:0006470
Prci12g1665 333 Gene3D - 1 293 IPR036457 -
Prci12g1665 333 SMART PP2C_4 13 290 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1665 Prci-Chr12 34386403 34394716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1665 1 301 PP2C-type Phosphatase Gene Family AT2G25070 68.713 4.11e-174 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1665 K17499 - gmx:100499713 549.28