Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1664 ATGGGCATATACCTCAGCGCCCCGAAAACAGAGAAGGCCTCTGATGATGGTGAGAATGACAGTCTTCGCTACGGGTTGTCTTCCATGCAGGGATGGCGTGCTACCATGGAAGATGCTCATGCAGCCCATCTAAATTTGGACGAGTCAACATCTTTCTTTGGTGTTTATGACGGCCATGGAGGTAAAGCTGTTGCTAAATTTTGTGCCAAATATCTGCACCGACAGGTTCTTAAGAATGAAGCTTATGTAGCTGGAGATGTAGGCACATCTTTGCGGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAATATAGAAAAGTTATCTGGCATGCTGGAGGGCTTTATATGGTCTCCCAGAGGAGGTGAAGGCAATGACCATTCTGATGATTGGGTTCATGAGGAGGGGCCACATTCTGATTTTACTGGACCAAACTCTGGATGCACAGCTTGTGTGGCAGTCATTCGAGGCAACCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCAAGGAAGGGCCAGGCACATAATTTATCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGAGAGAATTCTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAATTTGGCCAGAGCAATTGGAGACATGGAATTCAAGCAAAACAAGTTTTTACCTGCTGAAAAGCAGATCGTGACCGCTGATCCAGACATAACTTCTGTTGAACTTTGCGATGATGATGAATTTCTGGTAATAGCTTGTGACGGGATATGGGATTGCATGTCTAGCCAACAGCTTGTGGATTTTATACATTCACAGTTGAAGACGGAGGAAAAACTCTCGGCAGTTTGCGAGAAAGTATTTGATCGGTGCTTATCACCCACAGCCGGCGGCGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAGGCCTTCAAGTCCTGATGATTCCATTGTGGACAAGTCTCCATCATCAGCTCAACCATCCAAGGATGATGAGAGTTCAAATCACCCATCTAATGGCGAAAGAAGTTTAGACCAACCAGTCTAG 1110 0.4532 MGIYLSAPKTEKASDDGENDSLRYGLSSMQGWRATMEDAHAAHLNLDESTSFFGVYDGHGGKAVAKFCAKYLHRQVLKNEAYVAGDVGTSLRKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGEGNDHSDDWVHEEGPHSDFTGPNSGCTACVAVIRGNRLVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERERILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHSQLKTEEKLSAVCEKVFDRCLSPTAGGEGCDNMTMILVQFKRPSSPDDSIVDKSPSSAQPSKDDESSNHPSNGERSLDQPV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1664 369 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Prci12g1664 369 SMART PP2C_SIG_2 28 328 IPR001932 -
Prci12g1664 369 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Prci12g1664 369 CDD PP2Cc 23 328 IPR001932 -
Prci12g1664 369 MobiDBLite consensus disorder prediction 337 369 - -
Prci12g1664 369 MobiDBLite consensus disorder prediction 331 369 - -
Prci12g1664 369 PANTHER PROTEIN PHOSPHATASE 2C 18 327 IPR015655 GO:0004722|GO:0006470
Prci12g1664 369 Gene3D - 1 329 IPR036457 -
Prci12g1664 369 Pfam Protein phosphatase 2C 142 313 IPR001932 -
Prci12g1664 369 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Prci12g1664 369 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Prci12g1664 369 SMART PP2C_4 13 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1664 Prci-Chr12 34386403 34394716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1664 1 337 PP2C-type Phosphatase Gene Family AT2G25070 77.485 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1664 K17499 - gmx:100499713 632.484