Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1661 ATGAGTGATGAGTTTTTCTGTTTCCATTATTCTTTAGATCGATTGGAGTCGCGTCCGGAGGTAGAGAAGGATCGGAAGATGGCGATAAAGGTGAAGAACTCAACAATGGTGAGGCCGGCGGCGGAGACGCCTTGGAGGGCGCTGTGGAATTCCAACGTCGACTTGGTGGTGCCGAATTTCCACACGCCGAGCGTGTACTTCTACAGGCCGTCGACGATCGGCGGGTCCGGTTTCTTCGACGGCAAGGTTCTGAAGGAGGCTCTGAGCAAGGCTCTGGTGCCTTTCTATCCAATGGCTGGGCGGCTCCGCCGGGACGATGACGGCCGTATTGAGATTGACTGCAACGGCGAAGGCGTCCTCTTCCTGGAGGCCGAAACGGGAAAAGTCATTGACGATTTTGGTGACTTCGCCCCCACGCTTGAACTCCGGCAATTCATTCCCGCCGTGGATTATGCCCGTGGAATCGAAACTTATCCGCTGTTAGTGTTGCAGGTAACATATTTCAAATGTGGAGGAGTATCACTTGGAGTTGGTATGCAACATCATGTAACAGATGGATGTTCTGGTCTCCACTTCATAAATGCATGGTCTGATATAGCTCGTGGCCTTGATCTCACTATCCCTCCCTTCATCGACCGGAGCCTTCTCCGAGCTCGTGACCCTCCTCGGCCAGTTTTTGATCACGTCGAATACAAACCGCCTCCGGCCATGATCACTTCCTCCTCCTCGCCACCACCAACAAAACCAGGCCCAGGTTCATCAGTAGTATCCATATTCAAAATGACTCGTGACCAACTGAACCTTTTGAAATCTAAGTCCAAGGAAAATGGAAACACAGTCAACTATAGCTCCTACGAGATGTTGGCTGGACATGTTTGGAAAAGCACATGCAAGGCACGTGCCTTACCCTATGATCAAGAAACCAAATTGTACATTGCCACTGATGGAAGGTCTAGATTGAAGCCAGCCTTGCCAGAAGGTTACTTTGGAAATGTGATATTCACAGCCACACCAATGGCTATGGCAGGTGAACTCATGTCAAATCCTACTTGGTATGCTGCAAGCAAGATTCATAATTCTTTGGTGAGAATGGATGATGAGTATTTGAAGTCAGCTTTGGACTACCTTGAGCTTCAACCTGATCTGAAAGAGCTTGTTCGTGGGGCTCATACATTTAAGTGTCCCAATCTTGGGATCACAAGTTGGGTTAGATTGCCAGTACATGATGCTGATTTTGGATGGGGAAGGCCTATTTTCATGGGACCTGGTGGGATTGCGTATGAGGGATTGTCATTTATAATACCAAGCCCATCAAATGATGGCAGCTTGTCTGTGGCCATTGCTCTTCAGCCTGACCATATGAAAGTGTTTCAGGAATTGTTATACGATATTTAA 1395 0.4846 MSDEFFCFHYSLDRLESRPEVEKDRKMAIKVKNSTMVRPAAETPWRALWNSNVDLVVPNFHTPSVYFYRPSTIGGSGFFDGKVLKEALSKALVPFYPMAGRLRRDDDGRIEIDCNGEGVLFLEAETGKVIDDFGDFAPTLELRQFIPAVDYARGIETYPLLVLQVTYFKCGGVSLGVGMQHHVTDGCSGLHFINAWSDIARGLDLTIPPFIDRSLLRARDPPRPVFDHVEYKPPPAMITSSSSPPPTKPGPGSSVVSIFKMTRDQLNLLKSKSKENGNTVNYSSYEMLAGHVWKSTCKARALPYDQETKLYIATDGRSRLKPALPEGYFGNVIFTATPMAMAGELMSNPTWYAASKIHNSLVRMDDEYLKSALDYLELQPDLKELVRGAHTFKCPNLGITSWVRLPVHDADFGWGRPIFMGPGGIAYEGLSFIIPSPSNDGSLSVAIALQPDHMKVFQELLYDI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1661 464 Gene3D - 23 233 IPR023213 -
Prci12g1661 464 FunFam Spermidine hydroxycinnamoyl transferase 27 231 - -
Prci12g1661 464 Pfam Transferase family 28 460 - -
Prci12g1661 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 34 461 - -
Prci12g1661 464 FunFam Tryptamine hydroxycinnamoyl transferase 245 462 - -
Prci12g1661 464 Gene3D - 246 464 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1661 Prci-Chr12 34346658 34350312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1661 27 464 Monolignol Biosynthesis Gene Families AT5G48930 75.799 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1661 K13065 - qsa:O6P43_027958 721.079