Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1636 ATGAAGAAGAAGCATCACGTTGTGGAGGTGGAGAAGAAGAAGTATCCAATTGGTTCCGAGCATTATGAACTCTACGAGGAGATTGGCCATGGCGTGAGTGCCACGGTACACCGTGCTCTTTGTAAACAGTTAAATGAGACTGTTGCCATCAAAATTCTCGATTTTGAACGCGACAATGCTAATCTGAATAACATTTCTCGGGAAGCGCACACAATGAACCTAATTGACCACCCTAATGTCCTTAAATCACACTGCTCATTCGTTAGTGATCATAATCTGTGGGTTGTTATGCCATATATGGCTGGCGGTTCCTGTCTTCACATCTTGAAAGCTGCTTACCCTGATGGTTTAGAGGAGGTTATAATAGCCACAATATTGCGAGAGGTTTTAAAGGGTTTAGAATATCTTCATCAGCATGGGCATATACATCGAGATATCAAAGCTGGGAACATTCTAATTGATAACCACGGGGCAATCAAGCTTGGAGATTTGGGTGTAGCTGCTTGTCTTTTTGATTCTGGTGACAGGCAACGCACACGGAAAACATTTGTGGGGACACCCTGCTGGATGGCACCTGAGGTCATGGAGCAACTACATGGTTATGACTTCAAGGCTGATATCTGGTCATTTGGCATAACTGCGTTGGAGCTTGCCCATGGTCATGCTCCTTTCTCTAAGTATCCACCAATGAAGGTACTGTTGATGACATTGCAACAAGCACCGCCTGGCCTTGATTATGAAAGGGATAAGAAGTTCTCTCATTCATTTAAACAGATGATTGCTAGTTGTTTAGTGAAAGATCCTTCAAAACGACCAACTGCCAAAAAGTTGTTGAAGCATTCCTTCTTTAGGCAGGCTCGCTCAAATGATTATATTTCACGAAAACTTTTGGAGGGTCTGCCTGCTTTAGGTGATCGTATGAAAGCCCTAAAGATTAAAGAAGAAGACATGCTTGCTCAAGAGAAAATGCCTCATGGGCGAATGGAAGAAATATCTCAGGATGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTTGATGATATGAAGGCCCAGGCTTCCTTGATCCAGGATTCTGACGACCCCATAGATGATATCTCTCATACAGGATGTTCAAATTCCTTTTCTACACAAGATGAACGTAATAAGCCATCATCACGTCAAAACCAGGATCCTTGTCAAATTGCAGATATGGTCAACAATGATGAGGTTCAAAATCTATCAACTTCTGGTCCCACAGTTGGTTCCACACTAAATTGCACCGAGTCAAAATGTGAGGATCATGATTCTAGCATCACCAGTTCAAGCCATAGGCAGCACGTCTCCCAGCACTCCTCATCCCCTCTTGATAATCAGGTTGATCATAACATGAATGAAAAATCTGGTAGGGAAAATAGTGGGAGATCTGTAGAGGCCACAGCTATTCATTCCCTTCATGGTAGATTTTCAATGAGCATCTCCGACCAAGTTACACCTCCATTTATCCAGGGAGAAAGGGAGAAGCCGCAACATCAGCCCCAGAACAACTTAAACAACAATGCAACTACAGTTCCCCTATCAAGGGATGATACGCATTCTGACCTTTCTTCTAAAGCTTCAAAATCGTCAGTATCTACTTCTGATGACAATGACGACAAAGCAAAGGTACCAGTTGTTCACCAGAGAGGACGATTTAAGGTTACATCTGAAAATGTGGACTCAGAAAAGCCGACAGAGCATGCTGCCCAGCACTGA 1737 0.4312 MKKKHHVVEVEKKKYPIGSEHYELYEEIGHGVSATVHRALCKQLNETVAIKILDFERDNANLNNISREAHTMNLIDHPNVLKSHCSFVSDHNLWVVMPYMAGGSCLHILKAAYPDGLEEVIIATILREVLKGLEYLHQHGHIHRDIKAGNILIDNHGAIKLGDLGVAACLFDSGDRQRTRKTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQQAPPGLDYERDKKFSHSFKQMIASCLVKDPSKRPTAKKLLKHSFFRQARSNDYISRKLLEGLPALGDRMKALKIKEEDMLAQEKMPHGRMEEISQDEYKRGISGWNFNLDDMKAQASLIQDSDDPIDDISHTGCSNSFSTQDERNKPSSRQNQDPCQIADMVNNDEVQNLSTSGPTVGSTLNCTESKCEDHDSSITSSSHRQHVSQHSSSPLDNQVDHNMNEKSGRENSGRSVEATAIHSLHGRFSMSISDQVTPPFIQGEREKPQHQPQNNLNNNATTVPLSRDDTHSDLSSKASKSSVSTSDDNDDKAKVPVVHQRGRFKVTSENVDSEKPTEHAAQH 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1636 578 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Prci12g1636 578 MobiDBLite consensus disorder prediction 367 393 - -
Prci12g1636 578 MobiDBLite consensus disorder prediction 539 553 - -
Prci12g1636 578 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
Prci12g1636 578 FunFam serine/threonine-protein kinase BLUS1 isoform X1 103 336 - -
Prci12g1636 578 ProSiteProfiles Protein kinase domain profile. 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1636 578 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1636 578 MobiDBLite consensus disorder prediction 406 422 - -
Prci12g1636 578 MobiDBLite consensus disorder prediction 436 456 - -
Prci12g1636 578 MobiDBLite consensus disorder prediction 560 578 - -
Prci12g1636 578 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Prci12g1636 578 MobiDBLite consensus disorder prediction 497 578 - -
Prci12g1636 578 FunFam Serine/threonine-protein kinase BLUS1 11 99 - -
Prci12g1636 578 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 571 IPR047173 GO:0043539
Prci12g1636 578 MobiDBLite consensus disorder prediction 406 471 - -
Prci12g1636 578 MobiDBLite consensus disorder prediction 360 393 - -
Prci12g1636 578 CDD STKc_OSR1_SPAK 20 283 - -
Prci12g1636 578 Gene3D Transferase(Phosphotransferase) domain 1 103 335 - -
Prci12g1636 578 MobiDBLite consensus disorder prediction 502 524 - -
Prci12g1636 578 Pfam Protein kinase domain 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1636 Prci-Chr12 34209397 34216641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1636 10 570 MAP Kinase Kinase Kinase Kinase AT1G79640 65.432 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Prci12g1636 Pkinase 3.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1636 K08835 - qsa:O6P43_017908 774.237