Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1624 ATGACGAGTACTGTGTTAGTTCTCATCATCTTCCTCTCAACTTCTATATTGTCATCACTGTGTTCCCACGGCGACGAGGTGTCAGTGGTTATAGTGTCCAAGGACGGAGATGGAGATTATGGAAGTGTGAGTGAAGCCATAGCCAAAGCTCCAGAATTCAGTGAAACCCCCTACACCATCCAAGTCCGAAGCGGCACTTATAAGGAGTTCGTCGTGGTTCCGCGGGAGAAAACCAACATTAAGCTCGTCGGCGACGGCCCTAGTCAGACCAGAATAGTCGGCTCTCACCATGGCACCACACTAGATGTCTATGGAGAAGGGTTCGTCGCCGAGAACATAGGGCTGATGAACTCGGCCGGATTGAAAGCAAGCGCCGCTGTGGCGGTTCGCAACGAAGCCAACAACAGCATCTTCTTCCAATGCTCCATCGAAGGCTTCCAAGACACACTCTGGGCCGTCGCCGGCCGCCAGTTCTACAAGAACTGTGACATCTACGGCACCGTCGACTTCATCTACGGCGACGCCGCCGCCCTCTTCCAGGACTGCAACCTCTACGCTCGCTACCGCCCTTACGTCACCTTCACCGCCCAGTCCCGTCGCAGCCCCGACGACCACACTGCCTTCGCCTTCCAACACTGCCACTTCACGATGGCCCCCGAGGACGCCGCCATGAAGTCCAAGGTCCGAGCGACACTGGGGAGGCCATGGAGGCCGTATTCCACCGTCGCCGTCATTGACTCGTTCATTGACTCTATGGTGGACCCCACGGGTTGGGAAGAGATGCAAGGTCAGCCTACCGATAAGGTGACGTATGTGGAGTTTAACAATTATGGGCCTGGGTCCAACACATCTGGGAGAGTGAACTGGCCCGGTGTTAAAGTCCTTTCAGACCCAAATGAGGCCCAACAATTTACAGCTTCGGTTCTGTTAGATGCTGATTCTTGGATCCCACACAAGGGGGTTCCATATAATTGA 975 0.5467 MTSTVLVLIIFLSTSILSSLCSHGDEVSVVIVSKDGDGDYGSVSEAIAKAPEFSETPYTIQVRSGTYKEFVVVPREKTNIKLVGDGPSQTRIVGSHHGTTLDVYGEGFVAENIGLMNSAGLKASAAVAVRNEANNSIFFQCSIEGFQDTLWAVAGRQFYKNCDIYGTVDFIYGDAAALFQDCNLYARYRPYVTFTAQSRRSPDDHTAFAFQHCHFTMAPEDAAMKSKVRATLGRPWRPYSTVAVIDSFIDSMVDPTGWEEMQGQPTDKVTYVEFNNYGPGSNTSGRVNWPGVKVLSDPNEAQQFTASVLLDADSWIPHKGVPYN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1624 324 PANTHER PECTINESTERASE 29 317 - -
Prci12g1624 324 Pfam Pectinesterase 30 312 IPR000070 GO:0030599|GO:0042545
Prci12g1624 324 SUPERFAMILY Pectin lyase-like 29 323 IPR011050 -
Prci12g1624 324 Gene3D - 26 324 IPR012334 -
Prci12g1624 324 FunFam Pectinesterase 4 26 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1624 Prci-Chr12 34125588 34130257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1624 32 323 Carbohydrate Esterase AT4G02300 39.542 3.07e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1624 K01051 - gmx:102665195 432.95