Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1622 ATGGGTTCTGCAGAGGATAAAATAGACCTTGACTCGGATGAGGAGATTGCTTTTAGACCTTCACCATCTACAACAAAAGTCCATACTTTTGATTTTGAGACAGCAAATGTACTTTCTCCTGTAAATTTGGCCAGCTCATCCTTCTTTAAGCGGACACAGATCCGGCCTATCAGGAGCATGTATAATGTCTTAATTAAAGCAAAGATCAACATGTTGCTACCTTTTGGTCCCTTGGCGATATTGCTACATTATGTGACACAAAAGCATGGATGGGTGTTCTTTTTCAGCTTACTGGGTATTACTCCTTTGGCAGAACGCTTGGGTTATGCTACAGAGCAGCTTGCATTGTATACTGGACCAACAGTCGGAGGTCTTCTGAATGCCACATTTGGTAATGCCACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGAGTCGTTCAGCAGTCTCTATTGGGCTCAATTTTATCAAACATGCTTCTCGTTCTTGGATGTGCGTTCTTTACTGGAGGGATTGTCCACCAAAATAAGGTTCAGGTTTTCAACAAGGCATCTGCTGTTGTAAATTCAGGGCTGCTCTTGATGGCTGTGATGGGAATATTATTTCCTGCTGTGCTTCACTTTACGCACTCAGAGGTTCATTTTGGAAAATCAGAGCTATTGTTATCCAGATTTAGTAGCTGTATAATGCTAGTGGCATATGCAAGCTACCTTTTCTTTCAATTAAGAAGTCAGCATAATCTTTATAGCCCTATTGAAGAGGAAGATGGCAATAGTGAAAATGACGATGAGGAAGAAATTGAATTAACTAAATGGGAAGCAATAGGCTGGCTTGCTATTTTGACTGTATGGGTATCTGTATTGTCTGGATACCTTGTGGATGCTATAGAGGGGGCATCTGAGTCATTGCATATGCCTGTGGCTTTTATTAGTGTCATATTGCTTCCAATTGTAGGCAATGCTGCTGAGCATGCAAGCGCCATCATGTTTGCCATGAAGGATAAGCTTGATATCACACTTGGAGTTGCTATTGGATCTTCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTTGTTATTGGGTGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTCGAGACCGCCACACTTTTTATCACAGTGCTAGTAGTTGCATTTATGTTGCAGGAAGGGACTTCAAATTATTTTAAAGGCTTGATGCTTATTCTTTGCTACCTCATAGTTGCAGCCAGTTTTTTTGTACATGTAGACCCTAGAGATGATGATGGGTGA 1296 0.4035 MGSAEDKIDLDSDEEIAFRPSPSTTKVHTFDFETANVLSPVNLASSSFFKRTQIRPIRSMYNVLIKAKINMLLPFGPLAILLHYVTQKHGWVFFFSLLGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHQNKVQVFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELLLSRFSSCIMLVAYASYLFFQLRSQHNLYSPIEEEDGNSENDDEEEIELTKWEAIGWLAILTVWVSVLSGYLVDAIEGASESLHMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPRDDDG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1622 431 Pfam Sodium/calcium exchanger protein 91 246 IPR004837 GO:0016020|GO:0055085
Prci12g1622 431 Pfam Sodium/calcium exchanger protein 279 418 IPR004837 GO:0016020|GO:0055085
Prci12g1622 431 NCBIfam calcium/proton exchanger 72 421 IPR004798 GO:0006816|GO:0015369
Prci12g1622 431 FunFam Vacuolar cation/proton exchanger 120 259 - -
Prci12g1622 431 Gene3D - 266 422 IPR044880 -
Prci12g1622 431 Gene3D - 120 264 IPR044880 -
Prci12g1622 431 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 43 426 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci12g1622 431 NCBIfam calcium/proton exchanger 62 421 - -
Prci12g1622 431 FunFam Vacuolar cation/proton exchanger 266 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1622 Prci-Chr12 34096238 34106635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1622 45 430 Antiporters AT1G55730 75.255 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1622 K07300 - rcu:8260832 692.575