Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1618 ATGGCTTCAGTAGAGGAGCAGATAGATCATGACTTTGATGAAGAAATCGGTTCTGGCTCTATAGAACTTGGGAGAAAAGTCTCTAATTTTGGTGTTGAGATGACACTTGAGGCTAACACAACCATGCTCAGAAAAATATTGATTAGATCAATCATGAGCTTACACTTTGTTTTATCTAAGGAAAAAATCTGCCTGATGCTACCTTTTGGTCCCTTGGCATTACTGCTGCATTATCTTACTGGAAACCAAAATATCATGTTTTATTTGGGCTTATTGGGCATGATTCCTCTGGGCGATCGTCTAAACTATGCCTCTAAGGAGCTTGCTTACTACACACGGCCCATAGTGAGGGTTTATCTGTTAGCCATTTTTAGCAATGCAACTGATATGATCATATCCATTCATGCACTGAGAAATGGAATGTTGAGCACTGTTCGGGAATCTTTACTGGGCTCTGTCTTGTCAAACCTGCTTCTTATTCCTGGTTGTGCTTTCTTTACTGGAGGGATTGTCCATTCTATGAGGTTGCAGTACTTCAGTAAGGCATCTGCTACAGCAAGATCTGGGTTGCTCTTGATGGCTGTCATGGGAATAATGTTTCCAAATGTGCTTCACTTCACTCACACAGGGGTTCATTTTGGAAAATCAGAGTTATTTCTATCCAGATTCAGTAGCTGCATAATGCTGGTGGCGTACGCTTGTTACCTCCATTTTCAATTTCAAATTAAGCAGAGTCTTGATGATACTCTTACTCTGGAGGAAGTTGATGAGGAGGAAGTATGTGGATTAAGCAAATGGGAAGCAATCGGCTGGCTAGCTCTATTAATAGCATGGACATTTGTATTAACGAAACACCTTGTAGATGCGATCCAGGTTGCATCAGAGTCAACGAACATACCACAGGCTGTGATAACTGGTATTATACTTCCCCTTGTAGAACGTGCAAGTGCTATCATGTTTGCCATGAAGGACAAGATGGATATAACGCTTGAAGATGCTGTTGGATCATCTATACGTCTAATTATGTTTGTGATGCCCTTCAGCGTGCTTGTTGGCTGGTTCATGGGGCTATGGTTGGACTTGAATTTTCCACTTTTCCAGACAGCTGTACTTCTGATGTCTGTCCTAATTTCAGCATATGTTCTGCAGGAAGGGTTCTCACATTATTTGAAAGGGTTGATGCTTTTACTATGCTATTTGATTGTTGTGGCCAGTTTTTTGGTACATGTAGAGCCTGATTCAGAGGATTAA 1251 0.4117 MASVEEQIDHDFDEEIGSGSIELGRKVSNFGVEMTLEANTTMLRKILIRSIMSLHFVLSKEKICLMLPFGPLALLLHYLTGNQNIMFYLGLLGMIPLGDRLNYASKELAYYTRPIVRVYLLAIFSNATDMIISIHALRNGMLSTVRESLLGSVLSNLLLIPGCAFFTGGIVHSMRLQYFSKASATARSGLLLMAVMGIMFPNVLHFTHTGVHFGKSELFLSRFSSCIMLVAYACYLHFQFQIKQSLDDTLTLEEVDEEEVCGLSKWEAIGWLALLIAWTFVLTKHLVDAIQVASESTNIPQAVITGIILPLVERASAIMFAMKDKMDITLEDAVGSSIRLIMFVMPFSVLVGWFMGLWLDLNFPLFQTAVLLMSVLISAYVLQEGFSHYLKGLMLLLCYLIVVASFLVHVEPDSED 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1618 416 Pfam Sodium/calcium exchanger protein 269 406 IPR004837 GO:0016020|GO:0055085
Prci12g1618 416 Pfam Sodium/calcium exchanger protein 85 240 IPR004837 GO:0016020|GO:0055085
Prci12g1618 416 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 38 410 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci12g1618 416 NCBIfam calcium/proton exchanger 67 406 IPR004798 GO:0006816|GO:0015369
Prci12g1618 416 Gene3D - 254 408 IPR044880 -
Prci12g1618 416 Gene3D - 115 253 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1618 Prci-Chr12 34087009 34090769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1618 9 416 Antiporters AT1G55730 51.196 1.67e-136 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1618 K07300 - fve:101299212 448.743