Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1616 ATGAGGCCAAGTCAGCCACCGCCGGGCACCGGAGCTTCCAACCGTGACCGTAAGGGAGGTCGCCGTAAAGACCTAACCTTGCCGTTGCCGCCGCGAGACCATTCGAGGGCGGTGCCTCTTCCTCTTCCCCCTTCCAACTCGGCGCCCTCGACGAGTCACCATGCCGGCCCAGTTCACCAGCTTATCCCCTTCTCCGAGCTTGAACGGCTCAACAGAATCGGTAGCGGGAGCGGCGGGACAGTCTACAAGGTCATTCACCGACCTACTGGTCGGGTTTTTGCGCTGAAGGTTATATATGGTCATCACGAAGACTCCGTGCGCCGACAGATCCACCGCGAAGTCCAGATCCTTCGCGACGTGGATGACCCGAACGTGGTCAAGTGTTACGACATGTATGATCACAACGCTGAAATCCAAGTGCTTCTCGAGTTCATGGACGGTGGGTCCTTGGAAGGGAAACACATCCCCGACGAGCAGCACCTCGCAGATCTAGCTCGTCAGATTCTCCGTGGCCTCGCTTACCTCCATCGCCGCCACATCGTTCACCGAGACATCAAGCCGTCGAATCTTCTGATCAACTCGCGCAAGCAAGTCAAGATTGCGGACTTCGGGGTGGGTCGGATTCTTGCGCAAACCATGGATCCGTGTAATTCATCGGTGGGGACGATCGCTTATATGAGCCCCGAGAGAATTAATACCGACATCAACGATGGACAGTACGATGCGTATGCTGGCGATATATGGAGCCTTGGAGTGAGCATACTGGAATTTTACGTGGGTAGGTTTCCCTTTGCGGTGGGAAGGCAAGGCGATTGGGCCAGTTTGATGTGTGCGATTTGTATGTCTCAGCCGCCGGAGGCGCCGGCGACGGCGTCGAGTGAGTTTAGGGATTTTATATCGCGCTGTCTGCAGAGAGATCCGTCACGGAGGTGGACGGCGACGAGATTGTTAGGGCATCCTTTTATAAATCCGGGAATTCGACAACAGAACCCAGTTCATCAGAATCTTCATCAATTACTACCTCCACCTCGCCCGCTTTCTTCTTAG 1047 0.553 MRPSQPPPGTGASNRDRKGGRRKDLTLPLPPRDHSRAVPLPLPPSNSAPSTSHHAGPVHQLIPFSELERLNRIGSGSGGTVYKVIHRPTGRVFALKVIYGHHEDSVRRQIHREVQILRDVDDPNVVKCYDMYDHNAEIQVLLEFMDGGSLEGKHIPDEQHLADLARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYVGRFPFAVGRQGDWASLMCAICMSQPPEAPATASSEFRDFISRCLQRDPSRRWTATRLLGHPFINPGIRQQNPVHQNLHQLLPPPRPLSS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1616 348 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 29 324 - -
Prci12g1616 348 CDD PKc_MAPKK_plant_like 65 323 - -
Prci12g1616 348 SUPERFAMILY Protein kinase-like (PK-like) 64 342 IPR011009 -
Prci12g1616 348 ProSiteProfiles Protein kinase domain profile. 67 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1616 348 Pfam Protein kinase domain 68 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1616 348 SMART serkin_6 67 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1616 348 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Prci12g1616 348 MobiDBLite consensus disorder prediction 1 57 - -
Prci12g1616 348 MobiDBLite consensus disorder prediction 15 30 - -
Prci12g1616 348 Gene3D Phosphorylase Kinase; domain 1 48 146 - -
Prci12g1616 348 Gene3D Transferase(Phosphotransferase) domain 1 149 338 - -
Prci12g1616 348 FunFam Mitogen-activated protein kinase 2 147 334 - -
Prci12g1616 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1616 Prci-Chr12 34022677 34024425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1616 1 348 MAP Kinase Kinase Gene Family AT3G21220 71.591 9.84e-170 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Prci12g1616 Pkinase 6.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1616 K13413 - gmx:100786390 557.37