Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1605 ATGAGGTTTCTTTGGGTTCTTCTTCCTCTATGTTTTTCTTCCTTGTTATGCTCTGTTTCTGCTTTGAGCTCTGATGGGGTGACTCTATTGTCACTCTTGAGGCGTTGGACTTCTGTGCCTCATCCTGTAAAGTCCACCTGGAATCTCTCAGATTCCACCCCTTGCTCGTGGGTTGGAATCCAGTGCGACCATGCCCACAATGTGATCTCTCTTAACCTCACTGGCTATGGGATTGAGGGTCAATTAGGACCTGAGGTTGGACTTCTGAGTCACTTGAAGAGCCTTGTATTGATGGATAATGGGTTATCTGGAACAATTCCTCCCGAGTTAGGAAATTTTAGTGTGCTAGAGTACTTGGAACTTTCTGTAAACAGCTTCAGTGGACAAGTGCCTAGTAGCTTCAAAAGCTTGCAAAATTTGAAGTTTATCAGCCTTTCTTATAATCAATTCACTGGTCAAATCCCAGAATTCATCACTCAAATCCCTCACCTGCAACATGTTGAAATGTCTGATAACTCTCTAAACGGTTCCATTCCTTCAGGTATAGGAAACATGAGTGAGCTTTTGGTCCTGTATCTTCAGAATAATAAGTTGTCTGGGGAAATTCCTTCCTCAATTGGGAATTGTAGTAAATTGCAGGAATTGTTCTTGAATGAGAATCAGTTTCAGGGAACCCTTCCTGACACTCTTAACAATCTCCATGGTATAGTTTATTTGGGCTTTGCTAGTAATAATTTTAGGGGCACTATTCCATTGGGTTCTGGCAGTTGTAAAAGTCTGCTTTCCTTAGATCTGTCATACAACTCATTTAGTGGAGGAATTCCTTCAAGCTTGGGGAATTGTAGTGGTTTAACCCAATTTGCTGCTGTTAGCAGTGGCCTAACTGGCAATATTCCAACCTCCATTGGTCTTCTTCACAAGCTTTCCATTTTGAGGCTTCCTGTGAATCATTTGTCCGGAGAAATACCTCCAGAGATCAGAAATTGTAAGTCTTTGACACAGTTGCACTTGTATTCCAATCAACTTGAGGGTGAAATTCCTAGTGAGCTAGGAGAGTTGAGTGAATTACAGGATCTTGAATTGTTTTCCAACCGTTTTACCGGTGAAATTCCTCGTAGTGTCTGGAAGATTCAAAGTCTTGAGCATATCCTTGTGTACAATAATAGCCTTTCCGGAGAACTACCTTTGGAGATGACAGAGCTCAAGCATCTGAAGAATATCTCATTGTTTAACAACCACTTCTCTGGAGTCATACCTCAAACTTTGGGAATCAAAAGCCGTTTAGTACAGTTGGACTTTACGAATAATAAGTTCACTGGAAACATCCCGCCAAATCTTTGTTCTGGAAAGAAATTAACTATGCTGAATTTGGGCCTCAATCAGCTTCAAGGCAGAATACCTCCAGATGTAGGAAGGTGTACGACTCTTAGAAGGTTGATTCTCAAAGAAAATAATTTTACAGGGCCTTTTCCTGATTTTCAATATAATCCAAATCTCACGTTCATGGATATCAGCAGAAACAATATTAATGGCTCAATCCCACCAAGTTTGGGAAACTGCTCCAATGTCACTGATTTAATTTTGTCAAATAATAACTTTGCGGGGCATATACCACCAGAGCTAGGTCACCTTGCTAGCCTGAAGACTCTTCATCTTGCTCACAACCACTTAGAAGGTCCTTTGCCACCCGAGCTATCAAAGTGTACTAAAATGGATAGTTTTGATGTGGGATACAATTTACTGAATGGTGCATTTCCACCAAGTTTGAGGAGCTGGTCGGTGCTTACCACATTAATTCTATGGGAAAATCATTTTAATGGGGGCATCCCAGATTTCTTGTCAGAATTTAACGAGCTCTCTGAGCTGCAGCTTGGTGGGAATATGTTTGGAGGAAAAATTCCAGGATCAATTGGGGCACTGCAGAATCTGCGCTATGGGTTGAATCTAAGTGCTAATGGACTGATTGGCAAAATCCCTCCAGAGATGGGAAAATTAACAAATCTGCTAAGTCTGGATCTATCTCGAAACAATCTGACTGGAAGCACAAAAGTTCTTGCTGAGCTTTCTTCATTACTTACAGTCAATGTTTCATACAATTTGTTTCATGGTCCTGTACCAAATATGCTGATGAAGCTGCTTAATTCTTATCCTTCATCGTTTTTGGGAAATCCAGGCCTGTGTGTTAGTTGTTCATCATCAAACAGATTGGATTGCAATCAGAGCATCTATCTAAAGCCATGTGATGATAGAGTGACAAACCAGAAAGGCCTTAGTAAAGTTAAAATAGCAATGATAGCACTTGGATCGTCAATATTTTTTGTTCTTTTGCTGCTGGGAGTAGTCTCTGTGTGTAGCAGAAAATCTAATCAAGAAGTCCAGATCTCTGCCAAAGAAGGTACTTCCTTACTACTTAACAAAGTGATGGAGGCTACTGCTAACCTAAATGACCGATTTATCATTGGTAGAGGAGCTCATGGAGTAGTTTATAAAGCTACTGTAGATCCAGCCCAAGTTTTTGCTGTGAAGAAGCTTGCATTTGCTGGGAACAAAGGCAAGAGCTTAAGCATGGTTAGAGAAATTCAAACCCTTGGAAAGATTAGGCACCGGAATCTGGTCAAATTGGAAGACTTTTGGTTGAGAAAGGACTTTGGTCTGATCTTGTACACCTACATGCCAAATGGAAGCCTTCATGAAGTCTTGCATGAAAAGCATCCACCGCCATCCTTAGAGTGGAATGTCCGATATAAGATAGCCATTGGCATTGCTCATGGACTGGCCTATCTCCATTACGACTGTGATCCTCCCATAGTGCACCGTGACATCAAACCAAGAAACATACTCCTAGATTCTGACATGGAGCCTCACATAGCCGATTTTGGTATTGCCAAGCTTTTGGATCAAGCTTCTGCTTCAACACCATCTATATCTGTCCCTGGCACAGTAGGCTATATTGCACCAGAGAATGCATATACAACAGCAAATAATAGAGAATCTGATGCATACAGTTATGGGGTAGTTTTGCTTGAGTTAATAACCAGAAAGAAAGCAGTAGATTCATCATTTATGGAGGGCGTTGATATAGTGGGCTGGGTCAGAACTCTCTGGGGTGGAACAGAAGATGTTCACAAGATTGCTGATTCTGGCCTTGCCGGGCAGTTTTTGGATTCAAATGTTCTCGATCAAGCGACCAAAGTGCTTTTGGTGGCTCTGAGATGCACTGAGAATGATCCACGCAGGAGACCCACAATGAGAGATGTTGTCAAGCAATTAGAAGATGCTAATCCGAGGACAAGAAGTAAAAAGCTTCCAAGTTCGAACTCCTTAATCCATAGTTGA 3336 0.4146 MRFLWVLLPLCFSSLLCSVSALSSDGVTLLSLLRRWTSVPHPVKSTWNLSDSTPCSWVGIQCDHAHNVISLNLTGYGIEGQLGPEVGLLSHLKSLVLMDNGLSGTIPPELGNFSVLEYLELSVNSFSGQVPSSFKSLQNLKFISLSYNQFTGQIPEFITQIPHLQHVEMSDNSLNGSIPSGIGNMSELLVLYLQNNKLSGEIPSSIGNCSKLQELFLNENQFQGTLPDTLNNLHGIVYLGFASNNFRGTIPLGSGSCKSLLSLDLSYNSFSGGIPSSLGNCSGLTQFAAVSSGLTGNIPTSIGLLHKLSILRLPVNHLSGEIPPEIRNCKSLTQLHLYSNQLEGEIPSELGELSELQDLELFSNRFTGEIPRSVWKIQSLEHILVYNNSLSGELPLEMTELKHLKNISLFNNHFSGVIPQTLGIKSRLVQLDFTNNKFTGNIPPNLCSGKKLTMLNLGLNQLQGRIPPDVGRCTTLRRLILKENNFTGPFPDFQYNPNLTFMDISRNNINGSIPPSLGNCSNVTDLILSNNNFAGHIPPELGHLASLKTLHLAHNHLEGPLPPELSKCTKMDSFDVGYNLLNGAFPPSLRSWSVLTTLILWENHFNGGIPDFLSEFNELSELQLGGNMFGGKIPGSIGALQNLRYGLNLSANGLIGKIPPEMGKLTNLLSLDLSRNNLTGSTKVLAELSSLLTVNVSYNLFHGPVPNMLMKLLNSYPSSFLGNPGLCVSCSSSNRLDCNQSIYLKPCDDRVTNQKGLSKVKIAMIALGSSIFFVLLLLGVVSVCSRKSNQEVQISAKEGTSLLLNKVMEATANLNDRFIIGRGAHGVVYKATVDPAQVFAVKKLAFAGNKGKSLSMVREIQTLGKIRHRNLVKLEDFWLRKDFGLILYTYMPNGSLHEVLHEKHPPPSLEWNVRYKIAIGIAHGLAYLHYDCDPPIVHRDIKPRNILLDSDMEPHIADFGIAKLLDQASASTPSISVPGTVGYIAPENAYTTANNRESDAYSYGVVLLELITRKKAVDSSFMEGVDIVGWVRTLWGGTEDVHKIADSGLAGQFLDSNVLDQATKVLLVALRCTENDPRRRPTMRDVVKQLEDANPRTRSKKLPSSNSLIHS 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1605 1111 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 780 890 - -
Prci12g1605 1111 Pfam Protein kinase domain 819 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1605 1111 Gene3D Ribonuclease Inhibitor 291 464 IPR032675 -
Prci12g1605 1111 SMART LRR_typ_2 185 209 IPR003591 -
Prci12g1605 1111 SMART LRR_typ_2 137 161 IPR003591 -
Prci12g1605 1111 SMART LRR_typ_2 329 353 IPR003591 -
Prci12g1605 1111 SMART LRR_typ_2 89 113 IPR003591 -
Prci12g1605 1111 SMART LRR_typ_2 544 568 IPR003591 -
Prci12g1605 1111 SMART LRR_typ_2 665 688 IPR003591 -
Prci12g1605 1111 SUPERFAMILY Protein kinase-like (PK-like) 799 1090 IPR011009 -
Prci12g1605 1111 ProSitePatterns Protein kinases ATP-binding region signature. 820 843 IPR017441 GO:0005524
Prci12g1605 1111 SUPERFAMILY L domain-like 297 438 - -
Prci12g1605 1111 Pfam Leucine Rich Repeat 260 281 IPR001611 GO:0005515
Prci12g1605 1111 Gene3D Ribonuclease Inhibitor 465 735 IPR032675 -
Prci12g1605 1111 SUPERFAMILY RNI-like 407 739 - -
Prci12g1605 1111 MobiDBLite consensus disorder prediction 1091 1111 - -
Prci12g1605 1111 SMART serkin_6 814 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1605 1111 FunFam Serine/threonine-protein kinase-like protein CCR4 891 1108 - -
Prci12g1605 1111 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Prci12g1605 1111 Gene3D Ribonuclease Inhibitor 179 290 IPR032675 -
Prci12g1605 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 936 948 IPR008271 GO:0004672|GO:0006468
Prci12g1605 1111 FunFam Inactive leucine-rich repeat receptor-like protein kinase 161 252 - -
Prci12g1605 1111 FunFam Nuclear pore complex protein NUP107 23 160 - -
Prci12g1605 1111 Gene3D Transferase(Phosphotransferase) domain 1 891 1107 - -
Prci12g1605 1111 Gene3D Phosphorylase Kinase; domain 1 779 890 - -
Prci12g1605 1111 FunFam Leucine-rich repeat family protein 257 492 - -
Prci12g1605 1111 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 493 589 - -
Prci12g1605 1111 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 574 1085 - -
Prci12g1605 1111 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Prci12g1605 1111 SUPERFAMILY L domain-like 24 313 - -
Prci12g1605 1111 ProSiteProfiles Protein kinase domain profile. 814 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1605 1111 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 610 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1605 Prci-Chr12 33959964 33963875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1605 13 1099 Receptor kinase-like Gene Family AT1G73080 52.403 0.0 1066
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1605 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1605 - - gmx:100778035 1481.46