Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1604 ATGAGTCTCCAATTTATCTATTACGCTTGTTTGCCCTTTATATGTTGCTTCTGCCTTGAGTTCGATGGGTTGACTCTATTGTCTCTTCTCAACCACTGGACTTCTGCGCCTCCTTCCTTAAAGTCAAGCTGGAAGTCCTCTGATTCCACCCCTTGCTTATGGACAGGAATACAATGCGACCGTTACAGCAATGTGGTTTACCTAAACCTCACTGCATACCGGATTTTTGGTCAACTGGGAGCAGAAATTGGTCAGTTGGCTCACTTGCAGAACATTTTATTGGCCAAAAATGGGTTCTCAGGAAGGATACCTGAGTTAGGCAATTGCAGTTTGCTAACGTATATAGATCTTTCTGAGAACCATTTTTCTGGAAACATACCTCCAGAAATTGGTAACTGCAAATCTGTGAAGTCGTTACATTTATATTCCAATCAACTAGAGGGAGCCATTCCAAATGAATTGGGAAGACTGTGCAAACTAGAGGACCTTGAATTGTATTATAATCATTTGACCGGTGAAATTCCACTCACCATTTGGAAGATTCAAAGTCTTAAGCATATCCTTCTTCATAACAATAGCCTTTTTGGGAAATTACCTTCAGAGCTGACAGAGCTTAAGCATATGGAAAATATCTCATTGTTTGACAACCAATTCTTTGGATCAATACCTCAAGGCCTGGGAATCAATAGCAGTTTGGTGAAGTTGGACTTGATGAATAATAAGTTCACTGGTAACATCCCTCCAAATCTTTGTTTTGGAAAGAAATTACGCCTACTAAATTTAGGTTTTAATAGACTCCAAGGGGGCATACCTCATGATATTGGAAAATGTGCAACTCCTAGGAGGTTGGTTCTCAATGAAAATAATCTTTCTGGATCTATTCCTGAATTTGAAGGTAATCAGAATCTCATATACATGGACATCAGTAAGAACAATATTACTGGAACAATTCCATCAAGTTTAGGGAACTGTACAAATCTCACTGCTTTAATTTTGTCCGCCAACAACATTACTGGGCCTATACCGTCAGAGCTAGGAAACCTTTTCCACCTTCAGGCTTTGAACCTTGCTGACAACAACCTAGAAGGTCCTTTGCCAAAGCAACTATCATACTGTACCAAAATGGAGACATTTGATGTGGGATTCAATCTTCTTAATGGTTCATTCCCGTCAAACTTGAGGAGTTGGGGAAGACTGACCAAATTAACTTTAAGGGAGAATTGCTTTAGTGGGGTTATCCCATCTTTCTTCTCAGAATATGTCCAGCTTCTCGAGCTACAACTGGGAGGAAATATGTTGGGAGGAAATATGTTTGGAGGAAAAATTCCAACATCAATGGGATCATTGCAGAATCTCTTGTATGGATTGAATCTGAGTGCTAACAAATTAACTGGTGAGATTCCTTTAGAAATTGGGAAGTTGAAAAAGTTGCAAATTTTGGATATATCCTTGAACAATTTGACAGGAAGCATACATGTTCTTGCTGATCTCTCTTCATTAACAGAAGTCAATATATCACACAACTCCTTTGTCGGTGCTTTGCCAGAGTGGAAAATGCAACATCTGAATTTGCTGCCATCATCATTCATGGGCAACCCTGGTCTGTGTGTCCGTTGTTCAACCTCAAATGCCTCCACTTGCAAATCTAGCTTCTTGAAACCATGTGTTTCTGAATCAACTGATCACAAAGGCAGTAAACGTTCAATCTTATTTATAGTACTTGGATTTGTAGTGTTTATCATTTGCCTGTCGGTAATATTACTGATTTATGACCACCATTATGGCCAACGATCTCAGGAGAAGGTCTTTGGCCAAGGATCTGAGGACTTCGATCCTTATTTTCGTGAGCGAGTTTTTTCCATCAACGATGTTGGCCAAGGATCTATGTTGGAGGGGAATGCTGATTGTGAAGCGCAAGAGGCTTTGGATTCAAATGACAAAGGAGAATTCAAAATTATTGACCTGATAAATGCCACAGAGAATCTACATGATCGATATATTATTGGCAAAGGCGGGCATGGAATTGTTTATAAAGCCAGACTTGATTTTGGAGTTTTTGCTGTTAAGAAGGTTAACTTTCCCAGGAAAAGTAGGAGGAAAATAAACATGATCAAAGAAATTGAAATGACCAGAAAGACTAGGCATCAAAATGTGGCAAGATGCCTAGGCTTCTTGGTGAATGAGGAGTATGGTCTAACCATCAGCAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTGCATGAAAACAATCCACAAGCATGCTTAGCTTGGAATATCCGCTATCAGATTGCTATTGGAATTGCAAAAGGACTAGCATATCTCCATCACGACTTTGATCCTCCCATATTGCATCGAGATATCAAGCCAAAGAATATACTCCTTGACTCTGATATGCAGCCTTACATTATTGATTTTGGTATTTCCATTGCTTTGAATCAGTCCTCTACTGTGATGCGTATGCGGTCAACATATCATCTAGGTACACGAGGGTTTATGGCCCCAGAGATCGCCTATGTGATAGTACCAAGTTGTGAGCTTGATATATATAGTTATGGGGTAGTTTTGCTTGAGCTGATAACTAGAAAGCAAGTATTAGATTCCTCGTTTATGGACCAGGAAACCACTTTAGTAGGGTGGTTTAAGTCTGTATGGAGGGGAACAAGAGAACTTGAAGAAATTGTTGATTCAAGCCTCGGAAGGGAGCTTTCAGATGTAAATGTGAAGGCGCACGTTATCAAAGCACTTTTAGTGGCTTTGATATGTATTCAGAAAGATCCGGGAAAGAGACTGAAAATGATAGATGTTGTGGAATTCTTTGAAACACCCATAGATCCAGTAATTTTGGTTCAAGATCACGAAGCTTCATTTCATTTGGGATATTCCCTCGCCACTGCTGCGGCCTCTTTATTTTTTCAGGGGGAAGTCAAGATCCCTTCCGATGAAGGTTCGTTATCAGATCTTCATGAAAAGGAGGCTTCTGCAAACTCAAATAATCTGAATATCATCCGCCCAGGAACTCCTGGAGTTGTTTCTAAAGTTGAAGTTCCAACTGGTGATGTCTTTACTGTAAAGAAGCTTATATTTGCTGGGAACTTAGGCAACATCTTAAGTGCAAAGAGAGAAATGAAAATGCTTGGAATGGTTAAGCACCGAAACATAGTTAAAATGTTTTGGGGTTCAATCAAAGAAAAAGAAGGTGTACTGTGGTACGAGTACTTGCCAAATGGAAGCCTGCACGATGTTTTGCATGAAAAGAAACCCCCACCATCGCTGAATTGGGATGTTCGTTATAGAATAGCAGCTGGAATTGCTCGAGGTTTGGCATATCTTCATCATGATTGTGATCCTGCCATAGTGCACTGTGCCATCAAGCCAAAAAATATACTTCTGGATTCTGATATGGAGCCTCGTATTGCTGATTTTGGTGTTGCCAAGCTTTTGGTTCAATCTTCCACAACACCCTCCTCATCTATTCGAGTCACACCAGGAAGAAGTATATATACAACTATCACTAGGGAGCTTGACGTGTACAGTTATGGGGTAGTCTTGCTTCAGCTGATAACTCGAAAGAAGGCAGTGGATTCATCATTTATTAGGGGAACTGAGATAGGGGATTGGGTAAGAAGTCTCTTAGAGGAGACAGGAGACATTCATAAAATTGTTGATTCAAGCCTTTTAGAGGAGGTTTTGTATTCAAATCCCAATGAACTCCAACAAGTCACCGAATTGTTTTCCCTGGCTCTGAGATGCACAGAGGCAGATCCACGCATGAGACCAACTATGAGAGATGTTATCAAGCAATTTAATTGGTAA 3816 0.4017 MSLQFIYYACLPFICCFCLEFDGLTLLSLLNHWTSAPPSLKSSWKSSDSTPCLWTGIQCDRYSNVVYLNLTAYRIFGQLGAEIGQLAHLQNILLAKNGFSGRIPXELGNCSLLTYIDLSENHFSGNIPPEIGNCKSVKSLHLYSNQLEGAIPNELGRLCKLEDLELYYNHLTGEIPLTIWKIQSLKHILLHNNSLFGKLPSELTELKHMENISLFDNQFFGSIPQGLGINSSLVKLDLMNNKFTGNIPPNLCFGKKLRLLNLGFNRLQGGIPHDIGKCATPRRLVLNENNLSGSIPEFEGNQNLIYMDISKNNITGTIPSSLGNCTNLTALILSANNITGPIPSELGNLFHLQALNLADNNLEGPLPKQLSYCTKMETFDVGFNLLNGSFPSNLRSWGRLTKLTLRENCFSGVIPSFFSEYVQLLELQLGGNMLGGNMFGGKIPTSMGSLQNLLYGLNLSANKLTGEIPLEIGKLKKLQILDISLNNLTGSIHVLADLSSLTEVNISHNSFVGALPEWKMQHLNLLPSSFMGNPGLCVRCSTSNASTCKSSFLKPCVSESTDHKGSKRSILFIVLGFVVFIICLSVILLIYDHHYGQRSQEKVFGQGSEDFDPYFRERVFSINDVGQGSMLEGNADCEAQEALDSNDKGEFKIIDLINATENLHDRYIIGKGGHGIVYKARLDFGVFAVKKVNFPRKSRRKINMIKEIEMTRKTRHQNVARCLGFLVNEEYGLTISRYMENGSLHDVLHENNPQACLAWNIRYQIAIGIAKGLAYLHHDFDPPILHRDIKPKNILLDSDMQPYIIDFGISIALNQSSTVMRMRSTYHLGTRGFMAPEIAYVIVPSCELDIYSYGVVLLELITRKQVLDSSFMDQETTLVGWFKSVWRGTRELEEIVDSSLGRELSDVNVKAHVIKALLVALICIQKDPGKRLKMIDVVEFFETPIDPVILVQDHEASFHLGYSLATAAASLFFQGEVKIPSDEGSLSDLHEKEASANSNNLNIIRPGTPGVVSKVEVPTGDVFTVKKLIFAGNLGNILSAKREMKMLGMVKHRNIVKMFWGSIKEKEGVLWYEYLPNGSLHDVLHEKKPPPSLNWDVRYRIAAGIARGLAYLHHDCDPAIVHCAIKPKNILLDSDMEPRIADFGVAKLLVQSSTTPSSSIRVTPGRSIYTTITRELDVYSYGVVLLQLITRKKAVDSSFIRGTEIGDWVRSLLEETGDIHKIVDSSLLEEVLYSNPNELQQVTELFSLALRCTEADPRMRPTMRDVIKQFNW 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1604 1272 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1075 1272 - -
Prci12g1604 1272 SUPERFAMILY Protein kinase-like (PK-like) 997 1268 IPR011009 -
Prci12g1604 1272 SUPERFAMILY L domain-like 282 537 - -
Prci12g1604 1272 SUPERFAMILY Protein kinase-like (PK-like) 651 941 IPR011009 -
Prci12g1604 1272 ProSiteProfiles Protein kinase domain profile. 663 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1604 1272 SUPERFAMILY L domain-like 16 303 - -
Prci12g1604 1272 ProSitePatterns Protein kinases ATP-binding region signature. 669 697 IPR017441 GO:0005524
Prci12g1604 1272 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 18 178 - -
Prci12g1604 1272 Gene3D Ribonuclease Inhibitor 22 182 IPR032675 -
Prci12g1604 1272 Gene3D Phosphorylase Kinase; domain 1 634 738 - -
Prci12g1604 1272 Gene3D Phosphorylase Kinase; domain 1 980 1074 - -
Prci12g1604 1272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Prci12g1604 1272 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 214 548 - -
Prci12g1604 1272 Gene3D Transferase(Phosphotransferase) domain 1 739 947 - -
Prci12g1604 1272 Gene3D Transferase(Phosphotransferase) domain 1 1075 1272 - -
Prci12g1604 1272 Pfam Protein kinase domain 1007 1268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1604 1272 Pfam Protein kinase domain 667 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1604 1272 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 739 947 - -
Prci12g1604 1272 Gene3D Ribonuclease Inhibitor 255 548 IPR032675 -
Prci12g1604 1272 SMART serkin_6 663 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1604 1272 SMART serkin_6 998 1270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1604 1272 ProSiteProfiles Protein kinase domain profile. 998 1272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1604 1272 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Prci12g1604 1272 Gene3D Ribonuclease Inhibitor 183 254 IPR032675 -
Prci12g1604 1272 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 144 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1604 Prci-Chr12 33945221 33952560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1604 656 942 Receptor kinase-like Gene Family AT1G73080 43.878 3.56e-68 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1604 Pkinase 6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1604 - - pcin:129288056 2528.05