Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1603 ATGCCCCCTCAACGTTTTCTCACGGCAACTTCCTCTGCTTCACATTACATCAACTTCATCCATAGCACTGTGCAAATACCTGTACACAACCTTTCAATTACGCACACTTGTTCTAAACAGCACCAAAATGGGCTGATTCTATTGTCACTCCTCAACCACTGGACTTCTGTGCCTCCTTCTTTGAAGTCCAGCTGGAAGTCCTCTGATTCTACTCCTTGTTCTTGGATAGGAATAAAATGCGACCGCTACAACAACTTGGTCTTCCTAAACCTCACTGCATCTCAGATTTTTGGACCGCTTGGGACAGAAATTGGACAGTTGACTCACTTGCAGAACTTTTCGTTGGCAATAAATGGTTTCTCAGGAACAATACCCCCAGAGTTAGGCAATTGTAGTCTGCTTGAGTATATTGATCTTTCTAAGAATCAATTGTCTGGAAAAATGCCTCCAGAAATTGGAAACTGCAAATCTTTGAAGTCGTTACGTGAAATTCCACTTACCATTTGGAAGATTCAGAGTCTCAAGCATGTCCTTCTTCAGGATAATAACCTCACGGGGAAATTATCTTCTGAGTTGACAGAGCTCAAGCATCTGAAAAATATCTCATTGTCTGACAATCAATTCTTTGGACCAATTCCTCAAGGGTCTATTCCTAAATTTGAAGGTAATCAGAATCTTTTAGTCATAGACATTGGCAAGAACAACATCAGTGGAGTAATTCCATCAAGTTTGGGAAACTGTACAAATCTTATTGGTTTAATTTTGTCCATGAATAACATTATAGGTCTTATACCCTCAGAGCTGGGAAACCTCGTGAAACTTCAAGCTTTGAATATTGCTCACAATAACCTCGAAGGTATTTTGCCACCGGAACTATTGATTTTAAGAGAGAATCATTTCAGTGGGTTTTTCCCATATTTCTTCTCAGGTTATACTCAGCTTCTCGAGCTACAACTTGGTGGAAATATGATCCAAGGAACAATTCCTGCATCAATTGGATCATTGGTTCACTTGTATGAGTTGAATCTGAGCGCTAACAAATTAACAGGTGGGATCCCCGAAGACATTGGGAAGTTGAAAATGCTAGAAAGTCTAGATATATCCCTGAACAGTTTGACAGAGAGCATACAAGTTCTTGGCGAATTTGTTTCATTAACAGAAGTCAATATATCTTACAACTCATTCTTCGGTCCTTTACCAGAATGGAAGATTCAACGACTGAATTTATCTCCATCATCATTCTTGGGCAATCTTGGCCTTTGTGTTAGTTGTTCGACTTCAGATGGCCTGAGGTGCTTAAAAACTAGCCATTTGAAGCAATGCGCCACTAATTCAACTGACCAAGAAGGCAACAAACATTCGAATTTAGTATTTGGTCTAATATCTTATATGGAGGTCAATGTTAATTGTGAAGAGAAAGAGGCTTTGTTTTCAAATCACGAGAGGGGTTTTAGAATTATTGACCTAATAGATGCTGCAGATTTTCTACATGATCGATATATAATTGGTGGAGGAGGGCATGGGATTGTTTATAAAGCTGAACTTGGTGTTGGAGTTTTTGCTATTAAGGTTAAACTTGCACGGAGCAATAGGAGGAAATTGAACTTGTTCAGAGAAATTGAGATGACTAAGAACTTCATGCATGAAAATGTGGCAAGATGCCTAGGCTCTTCGACATGTGAAGAATATGGTCTAACCATCAGCAGATGCATGGAAAATGGAAGCCTTCACGATGTTTTGCATGAAAGCAATCCACAAACATGCTTATCTTGGAATGTCCGCTACAAGATTACTATTGGAATTGCAAAAGGACTGGCATATCTCCATCATGACTGCGATCCTCCCATATTACATCGAGACATCAAACCAAAGAATATACTCCTTGACTCTGATATGCATCCTTACATTACTGATTTTGGTATTTCCATTGCTTTGAATCAGTCCTCTACCATGGTACGTATGCGGTCAATGTATCATCTAGGTACCCGTGGGTTTATGGCACCAGAGATTGCATGTCTGATAGTGCCCGGCTGTGAGATTGATGCATACAGCTATGGGGTAGTTTTGCTAGAGCTGATAACGAGAAAGAAAGTATTGGATTCCTCATTTATGGAAGTGGAAACGACCTTAGTAGGGTGGTTTAAATCTATATGGAGGAGAACAACTGAACTTGAAGAGATTGTTGATTCAAGCCTTGCTAGGGAGCTTTCAGATTTAAATGTAAAGGTGCAAGTTATCAAAGTGCTTTTGGTGGTCTTGATATGCACTGAGGCAGCTCCAGGAAAGAGACTGAAGATGAGAGATGTAGTTGAGTTCTTTGAGGCACCCACTGATCCAGGAATTTTTGTTCAGCATGACAAAGCATTTCATTTAGGGAGTTCTCTTGCATCTGCTTCGGCCTCTATATTTTTTCAGGAGGAAGTCAAGATCACTACCAATAGAGGTTTTTTCCCAATTCTTGGTGAGGTGATGAAGGCTAATGCAAATGAGAACAATCCGAACATTATTGGCAGAGGAACTCATGGAGTTGTTTATAAAGTTCAACAAGGGACATCTCTAGTTTATGCTGTAAAGAAGGTTACATTTGCTGGGAACAAAGGAAAGATCCAAAGCATATTTAGAGAAATTACAATACTTGGAATGATTAAGCACCGGAATCTACTTAGATTGCTAGATTTTCAATTCAAAAAGGACTATTGTCTAATCTTGTACAGTTACATGTCAAATAAAAACCTTCATGAGGTTTTGCATGGAAAGAATCCACTACCACCTGTAGAGTGGAATGTGCGATGTAGGATAGCTGCTGGAATTGCTCATGGATTGGCTTATCTCCATTATGATTGTCATCCTGCCATAGTGCACCGTGCCATCAAGCCAAAAAATATGCTTGTAGATTCTGATATGGAGCCTCATATTGCTGATTTCGGTACTGCCAAACTTTTGGATCAATCTTCTTCAGCATCATCTTCATCTTCACTCGTTCCGAACACATTAGGGTATACAACACCAGAGGATACATGTACAACAGCAAATACAAGGGAGTTTGATGTCTACAGTTATGGGATAGTATTGCTTCAGTTAATAACCAGAAAGAAGGCAATGGATCTATCATTTATGGAGGGAACTGAGATAGGAATTTGGGCTAGAATTCTGTGGGAGGAAACAGGAGACATTCAAAACATTGTTGATTCAAGCCTTGCAGAAGAGAAGAATCCACACGAGACCCACAATGAGAGATGTTATCAAGCAATTAGAAGATATTATTAA 3267 0.3955 MPPQRFLTATSSASHYINFIHSTVQIPVHNLSITHTCSKQHQNGLILLSLLNHWTSVPPSLKSSWKSSDSTPCSWIGIKCDRYNNLVFLNLTASQIFGPLGTEIGQLTHLQNFSLAINGFSGTIPPELGNCSLLEYIDLSKNQLSGKMPPEIGNCKSLKSLREIPLTIWKIQSLKHVLLQDNNLTGKLSSELTELKHLKNISLSDNQFFGPIPQGSIPKFEGNQNLLVIDIGKNNISGVIPSSLGNCTNLIGLILSMNNIIGLIPSELGNLVKLQALNIAHNNLEGILPPELLILRENHFSGFFPYFFSGYTQLLELQLGGNMIQGTIPASIGSLVHLYELNLSANKLTGGIPEDIGKLKMLESLDISLNSLTESIQVLGEFVSLTEVNISYNSFFGPLPEWKIQRLNLSPSSFLGNLGLCVSCSTSDGLRCLKTSHLKQCATNSTDQEGNKHSNLVFGLISYMEVNVNCEEKEALFSNHERGFRIIDLIDAADFLHDRYIIGGGGHGIVYKAELGVGVFAIKVKLARSNRRKLNLFREIEMTKNFMHENVARCLGSSTCEEYGLTISRCMENGSLHDVLHESNPQTCLSWNVRYKITIGIAKGLAYLHHDCDPPILHRDIKPKNILLDSDMHPYITDFGISIALNQSSTMVRMRSMYHLGTRGFMAPEIACLIVPGCEIDAYSYGVVLLELITRKKVLDSSFMEVETTLVGWFKSIWRRTTELEEIVDSSLARELSDLNVKVQVIKVLLVVLICTEAAPGKRLKMRDVVEFFEAPTDPGIFVQHDKAFHLGSSLASASASIFFQEEVKITTNRGFFPILGEVMKANANENNPNIIGRGTHGVVYKVQQGTSLVYAVKKVTFAGNKGKIQSIFREITILGMIKHRNLLRLLDFQFKKDYCLILYSYMSNKNLHEVLHGKNPLPPVEWNVRCRIAAGIAHGLAYLHYDCHPAIVHRAIKPKNMLVDSDMEPHIADFGTAKLLDQSSSASSSSSLVPNTLGYTTPEDTCTTANTREFDVYSYGIVLLQLITRKKAMDLSFMEGTEIGIWARILWEETGDIQNIVDSSLAEEKNPHETHNERCYQAIRRYY 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1603 1088 ProSitePatterns Protein kinases ATP-binding region signature. 502 523 IPR017441 GO:0005524
Prci12g1603 1088 SUPERFAMILY L domain-like 60 427 - -
Prci12g1603 1088 SMART serkin_6 830 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1603 1088 SMART serkin_6 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1603 1088 Pfam Leucine rich repeat N-terminal domain 45 81 IPR013210 -
Prci12g1603 1088 Gene3D Ribonuclease Inhibitor 41 162 IPR032675 -
Prci12g1603 1088 Pfam Leucine rich repeat 225 284 IPR001611 GO:0005515
Prci12g1603 1088 Pfam Leucine rich repeat 293 348 IPR001611 GO:0005515
Prci12g1603 1088 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 163 435 - -
Prci12g1603 1088 Gene3D Ribonuclease Inhibitor 163 428 IPR032675 -
Prci12g1603 1088 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 571 778 - -
Prci12g1603 1088 ProSitePatterns Protein kinases ATP-binding region signature. 836 859 IPR017441 GO:0005524
Prci12g1603 1088 Gene3D Phosphorylase Kinase; domain 1 496 574 - -
Prci12g1603 1088 FunFam Leucine-rich repeat receptor-like kinase 45 162 - -
Prci12g1603 1088 Pfam Protein kinase domain 834 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1603 1088 Pfam Protein kinase domain 500 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1603 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Prci12g1603 1088 ProSiteProfiles Protein kinase domain profile. 496 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1603 1088 Gene3D Transferase(Phosphotransferase) domain 1 575 779 - -
Prci12g1603 1088 Gene3D Transferase(Phosphotransferase) domain 1 822 1079 - -
Prci12g1603 1088 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 34 774 - -
Prci12g1603 1088 SUPERFAMILY Protein kinase-like (PK-like) 482 772 IPR011009 -
Prci12g1603 1088 ProSiteProfiles Protein kinase domain profile. 830 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1603 1088 SUPERFAMILY Protein kinase-like (PK-like) 825 1037 IPR011009 -
Prci12g1603 1088 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 907 1086 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1603 Prci-Chr12 33919812 33937354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1603 80 771 Receptor kinase-like Gene Family AT1G17750 36.419 3.82e-131 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1603 Pkinase 2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1603 - - pcin:129289270 2119.74