Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1595 ATGATAATACTCCAGTTATTGATCATATGCTTGTCTGCTCCTTTACACTCGGCCTCTGCCTTAAGTTCAGATGGGTTGACTTTGTTGTCTCTTGCCAAACATTGGATTTCTGTGCTTCCTTCCTTAAAGTCAAACTGGAATTCATCTGATTCTACCCCTTGTTCTTGGATAGGAATACAATGTGATCATTACGGCAATGTGATCTTCCTAAATCTCACTAAATCTGGGATTTTTGGTCAACTTGGACCAGAAATTGGACAGTTGACTCACTTGCAGAACCTTGTGTTGGAGACAAATGGTTTCTCAGGAACAATACCGCTAGAGTTGGGCAACTGTAGTATGCTGGAGTATATAGATCTTTCTGATAACTACTTTGATGGAAATATGCCAGAAACCTTGCAAAAGTTGCAAAACTTGAGGTATTTGAGTTTTTCTTCTAATATGCTTACAGGTCAAATTCCTGATTACTTGTTTCAAGTTCCCAGACTGGAGGTGGTTGACCTGCACAAAAACAGTTTAAGTGGGTCAATCCCATCCAATATTGGAAACATGACGAAACTGTTGAAGTTGTATCTATCTAGGAATCAGTTGTCAGGGACAGTTCCTTCTTCCATTGTTAACTGCAGTAAGCTAGAGGCATTATTTGTGAACGATAACATGTTGACAGGAATTTTGCCTCAGAGCCTTAACAATCTCAATAATCTTATTTATTTAGATGTAAAAAATAATAGCCTTGGAGGTATAATCCCTCTTGGCTTTGGAAGTTGGGGCAAGCTATTTATTTTGGATCTGTCATTCAATGTATTTAGTGGAGGCATTCCCTCAGGCTTGGGGAATTGCAGCAGTTTAGCAGAATTTGCTGCGGTGAAGAGCAACCTAGTTGGAAGCATTCCATCATCCCTGGGGTTATTACAAAAGCTTTTGATTCTTCGCCTTCCTGATAACCGCTTGTCTGGAAATATACCTCCAGAAATTGGCAACTGCAAATCTTTGAAGAAGTTACATTTATATTCCAATCAATTGGTGGGGACAATTCCACAAGAATTGGGAGGATTGAGTAAATTAGAGGACCTTGAACTTTACTCCAACCACTTGACAGGTGAAATTCCACTTACCATTTGGAAAATTCAAAGTCTTGAGCATATCCTTCTTCACAATAATAGTCTGTTTGGGAAATTACCTTCGGAGATGACAGAGCTCAAGCATCTGAAAAATATTTCATTGTTTGACAACCAATTTTCTGGTTCAATTCCTCAAAACTTGGGAATCAATAGCAGTCTAGTGAAGTTGGACTTGATGAATAATAAGTTCACTGGTAACATACCACCAAATCTTTGTTTTGGAAAGCAATTACACCTACTGAATTTAGGTCTTAATCAACTTCAAGGGAGCATACCTCATGATCTGGGAAGATGTGCAACTCTTGGGAGGTTGGTTCTCAACAAAAATAATCTTTCTGGGCCTTTTCCTGAATTTGAAGGCAATCAGAATCTCGGATACTTGGACATCAGCAGGAACAACATCAATGGAACCATTCCATCAAGTTTGGGGAACTGCACAAATCTCACTGCTTTAATTATGTCCACAAACAATATTACTGGGTTTATACCCTCAAAGCTAGGAAACCTTGTGAACCTTCAGGTTTTGAACCTTGCTCACAACAGCCTAGAAGGTCCTTTGCCACATCAGCTGTCATACTGTACCAAAATGGAAACATTTGATGTGGGGTTCAATTTTCTGAACGGTTCATTCCCATCAAGCATGAGGAGTTGGACAGGGCTGACTAAATTAATTTTAAGAGAGAATCGCTTTAGCAGGGACATCCCAACTTTCCTATCAGAATATGACCAGCTTCTCGAGCTACAACTTGGTGGAAATATGTTTGGAGGAAAAATTCCTACATCAATGGGATCATTGCAGAATCTTTTATATGAGTTGAATCTGAGTGCTAATAAATTAACTGGTGAAATTCCTTTAGAAATTGGTAAGTTGCAAAAGTTGCAGAGTTTGGATATATCCTTGAATAATTTGACAGGAAGCTTACATGTTCTTGATAAACTTTCTTCATTAAGAGAAGTCAATATATCATACAACTCATTTGTTGGTCCTGTACCAGAATGGAAAATGCAACGCCTGAATTTGTCTTCATCATCATTCTTGGGCAATCCTGGCCTTTGTGTCCGTTGTTCGAGATTAAATCTCTCCAGTTGCATAAATTATAACCTCTTGAAGCCATGTGACTCTGAATCAACTAACCACAAGGGCAGTAAACGTTCAATTTTATTTATGGCACTTGGGTTTGTAGGGTTTGTCATTTGTTTGTCAGGAATACTAGTAATTTATGACCGTCATTCTAGCCAAAGATCTAAGAAGGAGGTACCTGCTTATCCTGATGAGCAAATTTACATCCGCCAGTTGCGTCCAATTTCTAACCTGAAAGACAACGTTGCTGATTACAAAGAACAGGAGGCTTCATATTCAAATGATGAAGGAGATTTCAGAATTATTGATTTAATGAATGCTACGGAGAATCTAAGTGATCAATATATAATTGGCGAAGGAGGGCATGGAATTGTTTATAAAGCCGAGCTTGATATTGGAGTTTTTGCTATTAAGAAAGTTAAATTTGGACAAAGCAATAGGAGGAAAGTAAACATGGTCAGAGAAATTGAAATGACTAGGAAGATTAGGCATCAAAATGTGGCAAGATGCCTAGGCTCCTGGATAGGTGAGGAATATGGTCTAACCATTAGCAAGTACATGGAAAATGGAAGCCTTCATGATGTCTTACATGAAAACGATCCACTACCATACTTAGAATGGAATGTCCGCTATAAAATTGCTATTGGAATTGCAAAAGGACTGGCTTATCTTCACCACAACTGTGATCCTCCAGTATTGCATCGAGATATCAAACCGAAAAATATACTCCTTGATTCTGATATGCAACCTTGTATTACCGATTTTGGTATTTCCATTGCTTTAAATCAATCCTCTACTACAGTTCATATGCGGTCGACATATCATCTAGGTACTCTTGGGTTTATGGCACCGGAGATTGCATGCATGGTAGTGCCGAGCTGTGAGCTTGATATATATAGTTATGGTGTAGTTTTGCTAGAGCTGATAACTAGAAAGAAAGTATTGGATTCCTCATTTGAGGTGGAGGAAACCACATTAGTAGGATGGTTTAAATCTATATGGAGGACAACAAGAGAACTTGAAGAGATTGTAGATTCAAGCATTGCAAGGGAGCTTTCAGATTTAAAAGTAATGGTGCAGGTTATCAAAGTGATTTTGGTGGCTTTGATATGTATTGAGACAGATCCAGGAAAGAGACTAAAAATGAGAGATGTAGTGGAATTCTTTGAAACATCCATAGATCCTGGAATTTTTGTTCGACGTTATGGAGAATTTCATTTGGGGAGTTCTCTTGCTACTGCTGTAGCCTCTTTGTTTTTTCAGGAGGAAGCCAAGATCCCTGCCAGTAGACATTATTCCTCAATACTTCACGAAGCGATGGAGGCTACTGCAAACCCAAACAATCTGAATGTTATTGGCAGAGGAACTCATGGAGTTGTTTATAAAGTTTCACTAGGTCCAGACCTAGTTTATGCTGTAAAGAAGCTTGCATTTGCAGGGAACAAAGGAAAGATCCAAAGCATAGTTAGAGAGATAAAAATCCTGATGAACATTAGGCACCGAAATCTTGTTGGATTACTAGACTTTTTGTTCAGAGAGAACTGTGGTATGCTTTTATACAGTTACATGACAAATGGAAACCTTCATGATGTTTTGCATGAAAAGAATCCACCATCATTGCTAGGTTGGACTGTTCGTTATAGGATAGCTGCTGGAATTGCTCATGGATTGGCTTATCTCCATTATGACTGTCATCCTGCCATTCTGCACCGTGCCATCAAACCAAAAAATATACTTTTAGATTATGACATGGAGCCTCATATTGCTGATTTTGGCATTGCCAAGCTTTTGGATGTATCTTCTTCTTCGAGATCATCTTCATCTGTTCCAGAGAATACATATACAACAGCAAATACTAGGGAGTCTGATGTCTACAGTTTTGGGGTAGTTTTGTTTGAGTTGATAACTAGAAAGAAGGCTGTGGATCCATCATTTAAGGAGGGAATTGAGATAGTGAGTTGGGTCAGAAGTCTATGGCAGGAAGCAAGAGGAATTTATAAAATTATTGATTCAAGCCTTGTAGAGGAGGTTTCGGATCCAAACGTTCTTAAACGAGTCATCAATGTGCTTTTGGTAGCTCTGAGATGCACTGAGGAGGACCCAGACATGAGACCCACGATGAGAGATGTTATCTACCAATTCAAAATGTAA 4353 0.3878 MIILQLLIICLSAPLHSASALSSDGLTLLSLAKHWISVLPSLKSNWNSSDSTPCSWIGIQCDHYGNVIFLNLTKSGIFGQLGPEIGQLTHLQNLVLETNGFSGTIPLELGNCSMLEYIDLSDNYFDGNMPETLQKLQNLRYLSFSSNMLTGQIPDYLFQVPRLEVVDLHKNSLSGSIPSNIGNMTKLLKLYLSRNQLSGTVPSSIVNCSKLEALFVNDNMLTGILPQSLNNLNNLIYLDVKNNSLGGIIPLGFGSWGKLFILDLSFNVFSGGIPSGLGNCSSLAEFAAVKSNLVGSIPSSLGLLQKLLILRLPDNRLSGNIPPEIGNCKSLKKLHLYSNQLVGTIPQELGGLSKLEDLELYSNHLTGEIPLTIWKIQSLEHILLHNNSLFGKLPSEMTELKHLKNISLFDNQFSGSIPQNLGINSSLVKLDLMNNKFTGNIPPNLCFGKQLHLLNLGLNQLQGSIPHDLGRCATLGRLVLNKNNLSGPFPEFEGNQNLGYLDISRNNINGTIPSSLGNCTNLTALIMSTNNITGFIPSKLGNLVNLQVLNLAHNSLEGPLPHQLSYCTKMETFDVGFNFLNGSFPSSMRSWTGLTKLILRENRFSRDIPTFLSEYDQLLELQLGGNMFGGKIPTSMGSLQNLLYELNLSANKLTGEIPLEIGKLQKLQSLDISLNNLTGSLHVLDKLSSLREVNISYNSFVGPVPEWKMQRLNLSSSSFLGNPGLCVRCSRLNLSSCINYNLLKPCDSESTNHKGSKRSILFMALGFVGFVICLSGILVIYDRHSSQRSKKEVPAYPDEQIYIRQLRPISNLKDNVADYKEQEASYSNDEGDFRIIDLMNATENLSDQYIIGEGGHGIVYKAELDIGVFAIKKVKFGQSNRRKVNMVREIEMTRKIRHQNVARCLGSWIGEEYGLTISKYMENGSLHDVLHENDPLPYLEWNVRYKIAIGIAKGLAYLHHNCDPPVLHRDIKPKNILLDSDMQPCITDFGISIALNQSSTTVHMRSTYHLGTLGFMAPEIACMVVPSCELDIYSYGVVLLELITRKKVLDSSFEVEETTLVGWFKSIWRTTRELEEIVDSSIARELSDLKVMVQVIKVILVALICIETDPGKRLKMRDVVEFFETSIDPGIFVRRYGEFHLGSSLATAVASLFFQEEAKIPASRHYSSILHEAMEATANPNNLNVIGRGTHGVVYKVSLGPDLVYAVKKLAFAGNKGKIQSIVREIKILMNIRHRNLVGLLDFLFRENCGMLLYSYMTNGNLHDVLHEKNPPSLLGWTVRYRIAAGIAHGLAYLHYDCHPAILHRAIKPKNILLDYDMEPHIADFGIAKLLDVSSSSRSSSSVPENTYTTANTRESDVYSFGVVLFELITRKKAVDPSFKEGIEIVSWVRSLWQEARGIYKIIDSSLVEEVSDPNVLKRVINVLLVALRCTEEDPDMRPTMRDVIYQFKM 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1595 1450 SUPERFAMILY RNI-like 222 533 - -
Prci12g1595 1450 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1257 1450 - -
Prci12g1595 1450 SUPERFAMILY Protein kinase-like (PK-like) 1167 1446 IPR011009 -
Prci12g1595 1450 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 354 1121 - -
Prci12g1595 1450 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 408 737 - -
Prci12g1595 1450 Gene3D Ribonuclease Inhibitor 477 753 IPR032675 -
Prci12g1595 1450 ProSitePatterns Protein kinases ATP-binding region signature. 851 873 IPR017441 GO:0005524
Prci12g1595 1450 Gene3D Transferase(Phosphotransferase) domain 1 1257 1450 - -
Prci12g1595 1450 Gene3D Transferase(Phosphotransferase) domain 1 921 1129 - -
Prci12g1595 1450 SUPERFAMILY Protein kinase-like (PK-like) 833 1123 IPR011009 -
Prci12g1595 1450 Gene3D Ribonuclease Inhibitor 181 298 IPR032675 -
Prci12g1595 1450 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Prci12g1595 1450 ProSiteProfiles Protein kinase domain profile. 1180 1450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1595 1450 Pfam Protein kinase domain 1183 1444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1595 1450 Pfam Protein kinase domain 849 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1595 1450 Pfam Leucine rich repeat 497 556 IPR001611 GO:0005515
Prci12g1595 1450 Pfam Leucine rich repeat 161 221 IPR001611 GO:0005515
Prci12g1595 1450 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 273 - -
Prci12g1595 1450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 966 978 IPR008271 GO:0004672|GO:0006468
Prci12g1595 1450 Gene3D Phosphorylase Kinase; domain 1 1153 1256 - -
Prci12g1595 1450 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 921 1128 - -
Prci12g1595 1450 ProSitePatterns Protein kinases ATP-binding region signature. 1186 1209 IPR017441 GO:0005524
Prci12g1595 1450 SMART LRR_typ_2 184 208 IPR003591 -
Prci12g1595 1450 SMART LRR_typ_2 639 664 IPR003591 -
Prci12g1595 1450 SMART LRR_typ_2 232 255 IPR003591 -
Prci12g1595 1450 SMART LRR_typ_2 543 567 IPR003591 -
Prci12g1595 1450 SMART LRR_typ_2 136 160 IPR003591 -
Prci12g1595 1450 SMART LRR_typ_2 352 376 IPR003591 -
Prci12g1595 1450 SMART LRR_typ_2 88 112 IPR003591 -
Prci12g1595 1450 SMART LRR_typ_2 304 328 IPR003591 -
Prci12g1595 1450 SMART serkin_6 845 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1595 1450 SMART serkin_6 1180 1449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1595 1450 SUPERFAMILY L domain-like 441 748 - -
Prci12g1595 1450 ProSiteProfiles Protein kinase domain profile. 845 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1595 1450 Coils Coil 809 829 - -
Prci12g1595 1450 FunFam Piriformospora indica-insensitive protein 2 297 395 - -
Prci12g1595 1450 Gene3D Phosphorylase Kinase; domain 1 810 920 - -
Prci12g1595 1450 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Prci12g1595 1450 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 20 178 - -
Prci12g1595 1450 Gene3D Ribonuclease Inhibitor 304 471 IPR032675 -
Prci12g1595 1450 SUPERFAMILY L domain-like 23 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1595 Prci-Chr12 33862697 33869029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1595 1150 1445 Receptor kinase-like Gene Family AT1G73080 49.351 6.57e-86 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1595 Pkinase 8.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1595 - - pcin:129288364 2849.69