Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1592 ATGATAATACTCCAGTTATTGATCATATGCTTGTCTGCTCCTTTACACTCGGCCTCTGCCTTAAGTTCAGATGGGTTGACTTTGTTGTCTCTTGCCAAACATTGGATTTCTGTGCTTCCTTCCTTAAAGTCAAACTGGAATTCATCTGATTCTACCCCTTGTTCTTGGATAGGAATACAATGTGATCATTACGGCAATGTGATCTTCCTAAATCTCACTAAATCTGGGATTTTTGGTCAACTTGGACCAGAAATTGGACAGTTGACTCACTTGCAGAACCTTGTGTTGGAGACAAATGGTTTCTCAGGAACAATACCGCTAGAGTTGGGCAACTGTAGTATGCTGGAGTATATAGATCTTTCTGATAACTACTTTGATGGAAATATGCCAGAAACCTTGCAAAAGTTGCAAAACTTGAGGTATTTGAGTTTTTCTTCTAATATGCTTACAGGTCAAATTCCTGATTACTTGTTTCAAGTTCCCAGACTGGAGGTGGTTGACCTGCACAAAAACAGTTTAAGTGGGTCAATCCCATCCAATATTGGAAACATGACGAAACTGTTGAAGTTGTATCTATCTAGGAATCAGTTGTCAGGGACAGTTCCTTCTTCCATTGTTAACTGCAGTAAGCTAGAGGCATTATTTGTGAACGATAACATGTTGACAGGAATTTTGCCTCAGAGCCTTAACAATCTCAATAATCTTATTTATTTAGATGTAAAAAATAATAGCCTTGGAGGTATAATCCCTCTTGGCTTTGGAAGTTGGGGCAAGCTATTTATTTTGGATCTGTCATTCAATGTATTTAGTGGAGGCATTCCCTCAGGCTTGGGGAATTGCAGCAGTTTAGCAGAATTTGCTGCGGTGAAGAGCAACCTAGTTGGAAGCATTCCATCATCCCTGGGGTTATTACAAAAGCTTTTGATTCTTCGCCTTCCTGATAACCGCTTGTCTGGAAATATACCTCCAGAAATTGGCAACTGCAAATCTTTGAAGAAGTTACATTTATATTCCAATCAATTGGTGGGGACAATTCCACAAGAATTGGGAGGATTGAGTAAATTAGAGGACCTTGAACTTTACTCCAACCACTTGACAGGTGAAATTCCACTTACCATTTGGAAAATTCAAAGTCTTGAGCATATCCTTCTTCACAATAATAGTCTGTTTGGGAAATTACCTTCGGAGATGACAGAGCTCAAGCATCTGAAAAATATTTCATTGTTTGACAACCAATTTTCTGGTTCAATTCCTCAAAACTTGGGAATCAATAGCAGTCTAGTGAAGTTGGACTTGATGAATAATAAGTTCACTGGTAACATACCACCAAATCTTTGTTTTGGAAAGCAATTACACCTACTGAATTTAGGTCTTAATCAACTTCAAGGGAGCATACCTCATGATCTGGGAAGATGTGCAACTCTTGGGAGGTTGGTTCTCAACAAAAATAATCTTTCTGGGCCTTTTCCTGAATTTGAAGGCAATCAGAATCTCGGATACTTGGACATCAGCAGGAACAACATCAATGGAACCATTCCATCAAGTTTGGGGAACTGCACAAATCTCACTGCTTTAATTATGTCCACAAACAATATTACTGGGTTTATACCCTCAAAGCTAGGAAACCTTGTGAACCTTCAGGTTTTGAACCTTGCTCACAACAGCCTAGAAGGTCCTTTGCCACATCAGCTGTCATACTGTACCAAAATGGAAACATTTGATGTGGGGTTCAATTTTCTGAACGGTTCATTCCCATCAAGCATGAGGAGTTGGACAGGGCTGACTAAATTAATTTTAAGAGAGAATCGCTTTAGCAGGGACATCCCAACTTTCCTATCAGAATATGACCAGCTTCTCGAGCTACAACTTGGTGGAAATATGTTTGGAGGAAAAATTCCTACATCAATGGGATCATTGCAGAATCTTTTATATGAGTTGAATCTGAGTGCTAATAAATTAACTGGTGAAATTCCTTTAGAAATTGGTAAGTTGCAAAAGTTGCAGAGTTTGGATATATCCTTGAATAATTTGACAGGAAGCTTACATGTTCTTGATAAACTTTCTTCATTAAGAGAAGTCAATATATCATACAACTCATTTGTTGGTCCTGTACCAGAATGGAAAATGCAACGCCTGAATTTGTCTTCATCATCATTCTTGGGCAATCCTGGCCTTTGTGTCCGTTGTTCGAGATTAAATCTCTCCAGTTGCATAAATTATAACCTCTTGAAGCCATGTGACTCTGAATCAACTAACCACAAGGGCAGTAAACGTTCAATTTTATTTATGGCACTTGGGTTTGTAGGGTTTGTCATTTGTTTGTCAGGAATACTAGTAATTTATGACCGTCATTCTAGCCAAAGATCTAAGAAGGAGGTACCTGCTTATCCTGATGAGCAAATTTACATCCGCCAGTTGCGTCCAATTTCTAACCTGAAAGACAACGTTGCTGATTACAAAGAACAGGAGGCTTCATATTCAAATGATGAAGGAGATTTCAGAATTATTGATTTAATGAATGCTACGGAGAATCTAAGTGATCAATATATAATTGGCGAAGGAGGGCATGGAATTGTTTATAAAGCCGAGCTTGATATTGGAGTTTTTGCTATTAAGAAAGTTAAATTTGGACAAAGCAATAGGAGGAAAGTAAACATGGTCAGAGAAATTGAAATGACTAGGAAGATTAGGCATCAAAATGTGGCAAGATGCCTAGGCTCCTGGATAGGTGAGGAATATGGTCTAACCATTAGCAAGTACATGGAAAATGGAAGCCTTCATGATGTCTTACATGAAAACGATCCACTACCATACTTAGAATGGAATGTCCGCTATAAAATTGCTATTGGAATTGCAAAAGGACTGGCTTATCTTCACCACAACTGTGATCCTCCAGTATTGCATCGAGATATCAAACCGAAAAATATACTCCTTGATTCTGATATGCAACCTTGTATTACCGATTTTGGTATTTCCATTGCTTTAAATCAATCCTCTACTACAGTTCATATGCGGTCGACATATCATCTAGGTACTCTTGGGTTTATGGCACCGGGAATTTTTGTTCGACGTTATGGAGAATTTCATTTGGGGAGTTCTCTTGCTACTGCTGTAGCCTCTTTGTTTTTTCAGGAGGAAGCCAAGATCCCTGCCAGTAGACATTATTCCTCAATACTTCACGAAGCGATGGAGGCTACTGCAAACCCAAACAATCTGAATGTTATTGGCAGAGGAACTCATGGAGTTGTTTATAAAGTTTCACTAGGTCCAGACCTAGTTTATGCTGTAAAGAAGCTTGCATTTGCAGGGAACAAAGGAAAGATCCAAAGCATAGTTAGAGAGATAAAAATCCTGATGAACATTAGGCACCGAAATCTTGTTGGATTACTAGACTTTTTGTTCAGAGAGAACTGTGGTATGCTTTTATACAGTTACATGACAAATGGAAACCTTCATGATGTTTTGCATGAAAAGAATCCACCATCATTGCTAGGTTGGACTGTTCGTTATAGGATAGCTGCTGGAATTGCTCATGGATTGGCTTATCTCCATTATGACTGTCATCCTGCCATTCTGCACCGTGCCATCAAACCAAAAAATATACTTTTAGATTATGACATGGAGCCTCATATTGCTGATTTTGGCATTGCCAAGCTTTTGGATGTATCTTCTTCTTCGAGATCATCTTCATCTGTTCCAGAGAATACATATACAACAGCAAATACTAGGGAGTCTGATGTCTACAGTTTTGGGGTAGTTTTGTTTGAGTTGATAACTAGAAAGAAGGCTGTGGATCCATCATTTAAGGAGGGAATTGAGATAGTGAGTTGGGTCAGAAGTCTATGGCAGGAAGCAAGAGGAATTTATAAAATTATTGATTCAAGCCTTGTAGAGGAGGTTTCGGATCCAAACGTTCTTAAACGAGTCATCAATGTGCTTTTGGTAGCTCTGAGATGCACTGAGGAGGACCCAGACATGAGACCCACGATGAGAGATGTTATCTACCAATTCAAAATGTAA 4020 0.3888 MIILQLLIICLSAPLHSASALSSDGLTLLSLAKHWISVLPSLKSNWNSSDSTPCSWIGIQCDHYGNVIFLNLTKSGIFGQLGPEIGQLTHLQNLVLETNGFSGTIPLELGNCSMLEYIDLSDNYFDGNMPETLQKLQNLRYLSFSSNMLTGQIPDYLFQVPRLEVVDLHKNSLSGSIPSNIGNMTKLLKLYLSRNQLSGTVPSSIVNCSKLEALFVNDNMLTGILPQSLNNLNNLIYLDVKNNSLGGIIPLGFGSWGKLFILDLSFNVFSGGIPSGLGNCSSLAEFAAVKSNLVGSIPSSLGLLQKLLILRLPDNRLSGNIPPEIGNCKSLKKLHLYSNQLVGTIPQELGGLSKLEDLELYSNHLTGEIPLTIWKIQSLEHILLHNNSLFGKLPSEMTELKHLKNISLFDNQFSGSIPQNLGINSSLVKLDLMNNKFTGNIPPNLCFGKQLHLLNLGLNQLQGSIPHDLGRCATLGRLVLNKNNLSGPFPEFEGNQNLGYLDISRNNINGTIPSSLGNCTNLTALIMSTNNITGFIPSKLGNLVNLQVLNLAHNSLEGPLPHQLSYCTKMETFDVGFNFLNGSFPSSMRSWTGLTKLILRENRFSRDIPTFLSEYDQLLELQLGGNMFGGKIPTSMGSLQNLLYELNLSANKLTGEIPLEIGKLQKLQSLDISLNNLTGSLHVLDKLSSLREVNISYNSFVGPVPEWKMQRLNLSSSSFLGNPGLCVRCSRLNLSSCINYNLLKPCDSESTNHKGSKRSILFMALGFVGFVICLSGILVIYDRHSSQRSKKEVPAYPDEQIYIRQLRPISNLKDNVADYKEQEASYSNDEGDFRIIDLMNATENLSDQYIIGEGGHGIVYKAELDIGVFAIKKVKFGQSNRRKVNMVREIEMTRKIRHQNVARCLGSWIGEEYGLTISKYMENGSLHDVLHENDPLPYLEWNVRYKIAIGIAKGLAYLHHNCDPPVLHRDIKPKNILLDSDMQPCITDFGISIALNQSSTTVHMRSTYHLGTLGFMAPGIFVRRYGEFHLGSSLATAVASLFFQEEAKIPASRHYSSILHEAMEATANPNNLNVIGRGTHGVVYKVSLGPDLVYAVKKLAFAGNKGKIQSIVREIKILMNIRHRNLVGLLDFLFRENCGMLLYSYMTNGNLHDVLHEKNPPSLLGWTVRYRIAAGIAHGLAYLHYDCHPAILHRAIKPKNILLDYDMEPHIADFGIAKLLDVSSSSRSSSSVPENTYTTANTRESDVYSFGVVLFELITRKKAVDPSFKEGIEIVSWVRSLWQEARGIYKIIDSSLVEEVSDPNVLKRVINVLLVALRCTEEDPDMRPTMRDVIYQFKM 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1592 1339 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 20 178 - -
Prci12g1592 1339 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 408 737 - -
Prci12g1592 1339 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Prci12g1592 1339 SUPERFAMILY RNI-like 222 533 - -
Prci12g1592 1339 SUPERFAMILY L domain-like 23 285 - -
Prci12g1592 1339 FunFam Piriformospora indica-insensitive protein 2 297 395 - -
Prci12g1592 1339 SMART LRR_typ_2 639 664 IPR003591 -
Prci12g1592 1339 SMART LRR_typ_2 184 208 IPR003591 -
Prci12g1592 1339 SMART LRR_typ_2 232 255 IPR003591 -
Prci12g1592 1339 SMART LRR_typ_2 543 567 IPR003591 -
Prci12g1592 1339 SMART LRR_typ_2 136 160 IPR003591 -
Prci12g1592 1339 SMART LRR_typ_2 352 376 IPR003591 -
Prci12g1592 1339 SMART LRR_typ_2 304 328 IPR003591 -
Prci12g1592 1339 SMART LRR_typ_2 88 112 IPR003591 -
Prci12g1592 1339 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Prci12g1592 1339 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 459 1018 - -
Prci12g1592 1339 Pfam Leucine rich repeat 161 221 IPR001611 GO:0005515
Prci12g1592 1339 Gene3D Transferase(Phosphotransferase) domain 1 832 1031 - -
Prci12g1592 1339 ProSitePatterns Protein kinases ATP-binding region signature. 1075 1098 IPR017441 GO:0005524
Prci12g1592 1339 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1146 1339 - -
Prci12g1592 1339 ProSiteProfiles Protein kinase domain profile. 1069 1339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1592 1339 SUPERFAMILY Protein kinase-like (PK-like) 833 1024 IPR011009 -
Prci12g1592 1339 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 273 - -
Prci12g1592 1339 Gene3D Ribonuclease Inhibitor 185 333 IPR032675 -
Prci12g1592 1339 SUPERFAMILY L domain-like 441 748 - -
Prci12g1592 1339 Coils Coil 809 829 - -
Prci12g1592 1339 ProSiteProfiles Protein kinase domain profile. 845 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1592 1339 FunFam Os07g0541700 protein 921 1012 - -
Prci12g1592 1339 Gene3D Phosphorylase Kinase; domain 1 1042 1145 - -
Prci12g1592 1339 Gene3D Ribonuclease Inhibitor 334 491 IPR032675 -
Prci12g1592 1339 Gene3D Ribonuclease Inhibitor 493 753 IPR032675 -
Prci12g1592 1339 Gene3D Transferase(Phosphotransferase) domain 1 1146 1339 - -
Prci12g1592 1339 SMART serkin_6 1069 1338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1592 1339 SMART serkin_6 845 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1592 1339 SUPERFAMILY Protein kinase-like (PK-like) 1056 1335 IPR011009 -
Prci12g1592 1339 Pfam Protein kinase domain 1072 1333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1592 1339 Pfam Protein kinase domain 849 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1592 Prci-Chr12 33862697 33869030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1592 1039 1334 Receptor kinase-like Gene Family AT1G73080 49.351 2.46e-86 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1592 Pkinase 4.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1592 - - pcin:129288364 2005.33