Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1590 ATGGCTTTCTGGGGAGTGGAAGTAAAACCCGGAAAATCTTTTACTCATAAATTTGATGACTTCAAAGGACGACTACATGTTTCAATGGCCACTTTGGGGGTTGGTTCTGCCCCAGCCAAAAGCAGACTCCAGTGTAATGTGGGCAACAGTAGCCCTGTTTATCTATGTTCTCTGTCTTCTGGAACGAATGAGTCATTGCAACTTCATTTGGAATTTGAGGAGGTTGATGATGTCATCTTTTCAGTGATTGGTCCTCGGAGTATTCACTTGTGTGGTTACTATCTTGGTAATAGCCGAAGAACCAATGTGATTGAGGAGTCAGAATCCTATGGAGAAGATATTGCAAACACTGAGACAGATAGATCTAATTGCAGCGAAGAAGATGAGTATGAGGATAGTTTTATTGATGATGATGCCAATCCAGACGTCTACCCAGGATCACCTATTTCACGTGAAGAGGAAGTTTCACCTGTTAACAAACATAAAGGTAGTCGCCGCAGACTACAGAGGAAGCAACAAAGAGTAGACTCAGATGATGATGGTGTGCCAATTTCATCTCTTTACAAGACTAAAGCTACTGCAAAGGTCTTGTCTGAGGAAATGGATGTTAGTGATGACAGGAGAGAAAGTGATGGCAGCCAGAAGAAAGGCAAAGATGAAGACAATAATGATATTAAACCAAATTCAAAATCAAAAGCTGGCAACATTCTTCTAGATACCAAGACACATAGTGGAGCTGAGTCTTTGGACAACGTAGTAGAATGTCACACCAATCTAAATGTGAGGAGTATTCAGAAATTGGAAAAAGAAGAGAGAGAAACAGAAGAGGAGGGTAAATTTGCTGAAGCAAAGGATGCTTGCAATGGCCAATTTATCGAAGTAAATAATGTGTTGGAAGGAGAGCCAAAAATGGACAATATCATCCAGGATCTTCTAATAAGAAATATGAGCGAGGGCCAAGCCTGTGATAAGAATGTTGTATTGCCTGCCACTGTAGTAGGTCCTGTGAAAAGTAGAGGAACAAAGAGGAAGAAGAAAGAACAGGCTCCCAAAGATTCACATTTTGAAGATGACAATGCTTACTGTAAAGAGTCCAAAGCCCCAAGAGACTCAGCAGGGACTGATATTGCTATCCCCAAATTTTCTGAAGGAAAGAATCAAGATTTGCAACAAAACAACAAAGAGAATGGGGATAATGGAACTCATGACTTCCCTGATGCGAATCAATCTGGTGATAGAAAGATGAAAAAAAGGAGGAAAAAAGACAAAAGTCAGGGGGATGTAGAAGTTAATACTTCTGATATGCCTCAATCATCTGCTAATGAAAATATTAGGACCCTAAAAAAGGATGAATACATTGTGGCTGATGCGAAGTCTTCTGCAGTTAAAACATTGCCAAATGGTTTAGTTATTCAAGAGCTGGAAAAGGGGATAGAAGATGGAAAAATTGCTGCATCAGGGAATAAGCTCACTGTCCTTTTCACTGGCAAGGTGAAGGATAATGATGAAGTCTTTGAGTCAAATGTTGGCCATGCACCTTTCAAGTTTCGCCTTGGTAAAGGACAAGTTTTAGAGGGTTGGGATGTTGGCCTTGAAGGTATGCGAATTGGAGGAAAGAGAAGACTCATAATACCACCATCCATGGGGTTTGGTAGTGAAGGACACGATGACAAAGTACCGCCAAACTCATGGCTGGTTTATGACTTTGAATTGGTTAAAGTCCGTTGA 1728 0.4074 MAFWGVEVKPGKSFTHKFDDFKGRLHVSMATLGVGSAPAKSRLQCNVGNSSPVYLCSLSSGTNESLQLHLEFEEVDDVIFSVIGPRSIHLCGYYLGNSRRTNVIEESESYGEDIANTETDRSNCSEEDEYEDSFIDDDANPDVYPGSPISREEEVSPVNKHKGSRRRLQRKQQRVDSDDDGVPISSLYKTKATAKVLSEEMDVSDDRRESDGSQKKGKDEDNNDIKPNSKSKAGNILLDTKTHSGAESLDNVVECHTNLNVRSIQKLEKEERETEEEGKFAEAKDACNGQFIEVNNVLEGEPKMDNIIQDLLIRNMSEGQACDKNVVLPATVVGPVKSRGTKRKKKEQAPKDSHFEDDNAYCKESKAPRDSAGTDIAIPKFSEGKNQDLQQNNKENGDNGTHDFPDANQSGDRKMKKRRKKDKSQGDVEVNTSDMPQSSANENIRTLKKDEYIVADAKSSAVKTLPNGLVIQELEKGIEDGKIAASGNKLTVLFTGKVKDNDEVFESNVGHAPFKFRLGKGQVLEGWDVGLEGMRIGGKRRLIIPPSMGFGSEGHDDKVPPNSWLVYDFELVKVR 575
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1590 575 MobiDBLite consensus disorder prediction 345 370 - -
Prci12g1590 575 MobiDBLite consensus disorder prediction 384 406 - -
Prci12g1590 575 Gene3D - 433 575 IPR046357 GO:0003755
Prci12g1590 575 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 42 574 - -
Prci12g1590 575 MobiDBLite consensus disorder prediction 109 186 - -
Prci12g1590 575 MobiDBLite consensus disorder prediction 198 227 - -
Prci12g1590 575 SUPERFAMILY FKBP-like 447 574 - -
Prci12g1590 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 483 572 IPR001179 GO:0003755
Prci12g1590 575 MobiDBLite consensus disorder prediction 198 237 - -
Prci12g1590 575 Coils Coil 264 284 - -
Prci12g1590 575 MobiDBLite consensus disorder prediction 124 138 - -
Prci12g1590 575 MobiDBLite consensus disorder prediction 429 443 - -
Prci12g1590 575 MobiDBLite consensus disorder prediction 337 444 - -
Prci12g1590 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 487 575 IPR001179 GO:0003755
Prci12g1590 575 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Prci12g1590 575 Gene3D Nucleoplasmin core domain 1 99 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci12g1590 Prci-Chr12 33850239 33857026 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1590 486 575 Calmodulin-binding Proteins AT5G48570 36.667 1.96e-14 74.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1590 K14826 - gmx:100798135 540.806