Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1588 ATGGCTTTCTGGGGAGTGGAAGTAAAACCCGGAAAATCTTTTACTCATAAATTTGATGACTTCAAAGGACGACTACATGTTTCAATGGCCACTTTGGGGGTTGGTTCTGCCCCAGCCAAAAGCAGACTCCAGTGTAATGTGGGCAACAGTAGCCCTGTTTATCTATGTTCTCTGTCTTCTGGAACGAATGAGTCATTGCAACTTCATTTGGAATTTGAGGAGGTTGATGATGTCATCTTTTCAGTGATTGGTCCTCGGAGTATTCACTTGTGTGGTTACTATCTTGGTAATAGCCGAAGAACCAATGTGATTGAGGAGTCAGAATCCTATGGAGAAGATATTGCAAACACTGAGACAGATAGATCTAATTGCAGCGAAGAAGATGAGTATGAGGATAGTTTTATTGATGATGATGCCAATCCAGACGTCTACCCAGGATCACCTATTTCACGTGAAGAGGAAGTTTCACCTGTTAACAAACATAAAGGTAGTCGCCGCAGACTACAGAGGAAGCAACAAAGAGTAGACTCAGATGATGATGGTGTGCCAATTTCATCTCTTTACAAGACTAAAGCTACTGCAAAGGTCTTGTCTGAGGAAATGGATGTTAGTGATGACAGGAGAGAAAGTGATGGCAGCCAGAAGAAAGGCAAAGATGAAGACAATAATGATATTAAACCAAATTCAAAATCAAAAGCTGGCAACATTCTTCTAGATACCAAGACACATAGCAGTGGAGCTGAGTCTTTGGACAACGTAGTAGAATGTCACACCAATCTAAATGTGAGGAGTATTCAGAAATTGGAAAAAGAAGAGAGAGAAACAGAAGAGGAGGGTAAATTTGCTGAAGCAAAGGATGCTTGCAATGGCCAATTTATCGAAGTAAATAATGTGTTGGAAGGAGAGCCAAAAATGGACAATATCATCCAGGATCTTCTAATAAGAAATATGAGCGAGGGCCAAGCCTGTGATAAGAATGTTGTATTGCCTGCCACTGTAGTAGGTCCTGTGAAAAGTAGAGGAACAAAGAGGAAGAAGAAAGAACAGGCTCCCAAAGATTCACATTTTGAAGATGACAATGCTTACTGTAAAGAGTCCAAAGCCCCAAGAGACTCAGCAGGGACTGATATTGCTATCCCCAAATTTTCTGAAGGAAAGAATCAAGATTTGCAACAAAACAACAAAGAGAATGGGGATAATGGAACTCATGACTTCCCTGATGCGAATCAATCTGGTGATAGAAAGATGAAAAAAAGGAGGAAAAAAGACAAAAGTCAGGGGGATGTAGAAGTTAATACTTCTGATATGCCTCAATCATCTGCTAATGAAAATATTAGGACCCTAAAAAAGGATGAATACATTGTGGCTGATGCGAAGTCTTCTGCAGTTAAAACATTGCCAAATGGTTTAGTTATTCAAGAGCTGGAAAAGGGGATAGAAGATGGAAAAATTGCTGCATCAGGGAATAAGCTCACTGTCCTTTTCACTGGCAAGGTGAAGGATAATGATGAAGTCTTTGAGTCAAATGTTGGCCATGCACCTTTCAAGTTTCGCCTTGGTAAAGGACAAGTTTTAGAGGGTTGGGATGTTGGCCTTGAAGGTATGCGAATTGGAGGAAAGAGAAGACTCATAATACCACCATCCATGGGGTTTGGTAGTGAAGGACACGATGACAAAGTACCGCCAAACTCATGGCTGGTTTATGACTTTGAATTGGTTAAAGTCCGTTGA 1731 0.4079 MAFWGVEVKPGKSFTHKFDDFKGRLHVSMATLGVGSAPAKSRLQCNVGNSSPVYLCSLSSGTNESLQLHLEFEEVDDVIFSVIGPRSIHLCGYYLGNSRRTNVIEESESYGEDIANTETDRSNCSEEDEYEDSFIDDDANPDVYPGSPISREEEVSPVNKHKGSRRRLQRKQQRVDSDDDGVPISSLYKTKATAKVLSEEMDVSDDRRESDGSQKKGKDEDNNDIKPNSKSKAGNILLDTKTHSSGAESLDNVVECHTNLNVRSIQKLEKEERETEEEGKFAEAKDACNGQFIEVNNVLEGEPKMDNIIQDLLIRNMSEGQACDKNVVLPATVVGPVKSRGTKRKKKEQAPKDSHFEDDNAYCKESKAPRDSAGTDIAIPKFSEGKNQDLQQNNKENGDNGTHDFPDANQSGDRKMKKRRKKDKSQGDVEVNTSDMPQSSANENIRTLKKDEYIVADAKSSAVKTLPNGLVIQELEKGIEDGKIAASGNKLTVLFTGKVKDNDEVFESNVGHAPFKFRLGKGQVLEGWDVGLEGMRIGGKRRLIIPPSMGFGSEGHDDKVPPNSWLVYDFELVKVR 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1588 576 MobiDBLite consensus disorder prediction 338 445 - -
Prci12g1588 576 MobiDBLite consensus disorder prediction 198 239 - -
Prci12g1588 576 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 488 576 IPR001179 GO:0003755
Prci12g1588 576 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 42 575 - -
Prci12g1588 576 MobiDBLite consensus disorder prediction 346 371 - -
Prci12g1588 576 MobiDBLite consensus disorder prediction 109 186 - -
Prci12g1588 576 MobiDBLite consensus disorder prediction 385 407 - -
Prci12g1588 576 MobiDBLite consensus disorder prediction 198 227 - -
Prci12g1588 576 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 484 573 IPR001179 GO:0003755
Prci12g1588 576 SUPERFAMILY FKBP-like 448 575 - -
Prci12g1588 576 MobiDBLite consensus disorder prediction 124 138 - -
Prci12g1588 576 Gene3D - 434 576 IPR046357 GO:0003755
Prci12g1588 576 Coils Coil 265 285 - -
Prci12g1588 576 MobiDBLite consensus disorder prediction 430 444 - -
Prci12g1588 576 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Prci12g1588 576 Gene3D Nucleoplasmin core domain 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1588 Prci-Chr12 33850237 33857026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1588 487 576 Calmodulin-binding Proteins AT5G48570 36.667 1.99e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1588 K14826 - gmx:100798135 536.954