Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1586 ATGCCAGGAGGAAAGCTTCATGATGCTTTGCGTGAAAAGAATCCACCACCATCCCTGAAATGGAAAGTCCATTTTACAATAGCAACTGGAATTGCTTGTGGGTTGGCCTATCTCCATCTTGATTGTCATCCTGCCATTGTACATGGTGCCATCAAACCAAGAAATATACTACTAGTTTCTGATATGGAGCCTCATATTGTTGATTTCAGTTTTGCCCAGTTTTTCGATCAATCTTCTTCAACACCATCTTCATCTGTTCCAGCCGTTGATGTCTACGATTATGGGATAGTTTTGCTTCAATTGATAACCCAGAAGAAGGCAGTAGATCCATCATTTATAGAGGGAATTGAGATAAGGAGCTGGGTGAGAACTGTGTTGGGGGAAACAGGAGAAATTAATAAAATTGTTGATGAGAGCCTTGCAGAGGAGGTTTTGAATCCATTTGTACTTGCGCAAGTTATTGATGTGCTTAAGGTGGTTCTGAGATGCACTGAGAAGAATCCATACATGAGACCCACAATGAGGGACATTATCAGGCAACTTCTTGGTAAAACATGGCTATCATATAGATGA 573 0.4084 MPGGKLHDALREKNPPPSLKWKVHFTIATGIACGLAYLHLDCHPAIVHGAIKPRNILLVSDMEPHIVDFSFAQFFDQSSSTPSSSVPAVDVYDYGIVLLQLITQKKAVDPSFIEGIEIRSWVRTVLGETGEINKIVDESLAEEVLNPFVLAQVIDVLKVVLRCTEKNPYMRPTMRDIIRQLLGKTWLSYR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1586 190 SUPERFAMILY Protein kinase-like (PK-like) 1 181 IPR011009 -
Prci12g1586 190 ProSiteProfiles Protein kinase domain profile. 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1586 190 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Prci12g1586 190 Pfam Protein kinase domain 1 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1586 190 Gene3D Transferase(Phosphotransferase) domain 1 86 186 - -
Prci12g1586 190 Gene3D Transferase(Phosphotransferase) domain 1 1 85 - -
Prci12g1586 190 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1586 Prci-Chr12 33766947 33768129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1586 1 181 Receptor kinase-like Gene Family AT1G17750 45.813 2.70e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci12g1586 Pkinase 3.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1586 - - pcin:129287857 372.089