Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1574 ATGGAGATAATAACTACCCCTGCGCTATCCCCAGCTCGAGTCAGTGTCAGTGATTTTGCAGTTGGGCTTGAAGAACTTGTCTCAATGTTTAAGGATCATAACATTTCTGCTTTAGAGCGATATGGAGGGGTTAAAGGTTTATCGAGTTTACTACAATCAAGTCCCGAGAAGGGGATTAATGGGAGTAATGATGATCTATTAAGAAGGAGAACAGCATTTGGAACAAATACTTATCCTCGGAAAAAGGGGAGAAGTTTCTTTATGTTCCTATGGGAAGCTTGGCAAGATCTGACCCTAATCATATTGATAATAGCAGCTGCAGTATCATTAGTATTGGGAATAAAAACAGAGGGTCTGAAAGAAGGGTGGTACGATGGGGGAAGTATTGCTTTTGCAGTTTTTCTTGTCATTGTAGTTACAGCTGTTAGTGATTATCGGCAATCTCTGCAGTTTCAGAATTTGAATGCAGAAAAACAAAATATACAACTAGAGGTCATTAGAGGTGGTAGAATAGTAAAGATATCAATATTTGATGTTGTTGTTGGTGATGTTGTGCCTCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTTTTAATCACCGGCCACTCACTTGCCATTGATGAATCTAGCATGACTGGTGAAAGCAAGATTGTTCATAAAGACCATAAAGCACCATTTTTGATGTCTGGCTGCAAAGTAGCAGATGGAGTTGCTGCTATGCTGGTAACTGGAGTTGGTATCAATACTGAGTGGGGACTGTTGATGGCAAGTATCTCGGAAGATACTGGCGAAGAGACTCCATTGCAGGTACGTTTGAATGGAGTAGCGACTTTTATTGGTATAGCAGGGCTTTCAGTAGCTGCCATTGTGTTGGCTGTCCTCTTGGGAAGATACTTTTCTGGAAGTACAAAGGATCTGGATGGAAATGTTGAGTTTGTCGGTGGACAGACTAGCGTTAGTAGCGCAGTAGATGGGGTCATCAAAATTTTTACTATAGCTGTCACTATTGTGGTTGTTGCAGTACCTGAAGGTCTTCCCTTGGCTGTCACCTTAACCCTTGCTTACTCAATGCGAAAGATGATGGCTGACAAAGCCTTGGTTCGAAGGCTCTCAGCTTGTGAAACTATGGGTTCTGCTACAACAATTTGCAGTGATAAGACAGGAACATTGACATTGAATCAGATGACTGTAGTTGAGGCATATGTCGGGAAGAAGAATATCAAGCTACCGGAGGACTTACCAAATTTGCACTCAGAAGTTGTATCTCTAATAAATGAGGGTGTTGCACAGAATACTAGCGGAAATGTTTTTGAGCCCAAGGGTTGTGGAGAAGTAGAAATTTCGGGATCTCCTACAGAAAAGGCAATCCTTTCTTGGGCTGTCAAGTTGGGAATGAAATTCGATCTTGCCAAGTCAAATTCAACAATTCTACATGTCTTCCCCTTCAACTCGGAGAAAAAGCGAGGGGGTGTTGCGCTGAAGCTGGCGGACTCCAGTGTGCACATTCATTGGAAAGGAGCTGCGGAGATAGTTCTAGGCTCATGTACTCAATACCTTGATTCAAATGGTCATTTGCAATCAATTGATGCCGAGGACTTTTTCAAGCAGGCTATTGATGACATGGCTGCTCGCAGCTTGCGGTGTGTTGCCATTGCATATAGATCATATGAAACGGACAAAGTTCCCTCTAATGAGGATGATTTGGCCAAGTGGTCCTTGCCTGAGGATGAACTTGTTTTGCTTGCTATTGTTGGTATAAAGGATCCCTGTCGCCCTGGAGTCAAAGATGCTGTCAAATTATGCACTGAAGCTGGGGTTAAGGTACGCATGGTCACTGGAGACAATATTCAGACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTTTCTTCAAATGAAGATCTCGCTGAGCCAAATGTAATTGAAGGAAAGAGATTTCGTTCGTTATCTGAAAATGATAGGGAACATGTTGCTAAACAAATAACAGTTATGGGGAGATCTTCTCCAAATGACAAGCTTTTGCTTGTGCAAGCACTGCGCAAGGGAGGAGAAGTTGTTGCTGTCACAGGAGATGGCACTAATGATGCGCCTGCACTTCACGAGGCAGATATTGGTCTTTCAATGGGCATTCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATCATAATCCTGGATGATAACTTTGCATCGGTAGTGAAGGTTGTCCGATGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAGCTCACAGTTAATGTTGCAGCTCTTGTTATAAATGTTGTGGCTGCAATATCTTCTGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGGTCAACCTTATCATGGACACTCTTGGGGCCCTTGCATTGGCCACTGAACCACCAACGGACCATCTTATGCACAGATCACCAGTTGGCAGAAGGGAATCTCTTATAACAAATATTATGTGGAGGAACTTGCTCATACAGGCTTTATATCAAGTTACTGTTCTACTTGTTCTGAACTTCGGCGGCGATCAAATTCTGCGAAGTCATTACTCTAGAGCTCGTACACATCAACTGAAGAATTCTTTGATATTCAATGCATTTGTCCTCTGCCAAATATTCAATGAGTTCAACGCTCGGAAACCAGACGAAATGAATGTCTTCCGTGGAGTGACTAAGAACCACCTCTTCATTGGAATTGTTGCAATCACCTTTGTACTTCAGATACTCATCATCGAGTTCCTTGGAAAGTTCACGAAAACCGTGAGGCTTGATTGGAAGATGTGGCTTATTTCTCTTGCTATAGGGCTGTTCAGCTGGCCCCTGGCTGTAGTGGGAAAATTAATTCCTGTTTCAAAAACACCACTCTCACGGTACATGTTAAAGCCATTGAGGCGATGCTGGAAGCCTCGTGGTTTATGA 2928 0.4279 MEIITTPALSPARVSVSDFAVGLEELVSMFKDHNISALERYGGVKGLSSLLQSSPEKGINGSNDDLLRRRTAFGTNTYPRKKGRSFFMFLWEAWQDLTLIILIIAAAVSLVLGIKTEGLKEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRIVKISIFDVVVGDVVPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKAPFLMSGCKVADGVAAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIAGLSVAAIVLAVLLGRYFSGSTKDLDGNVEFVGGQTSVSSAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGKKNIKLPEDLPNLHSEVVSLINEGVAQNTSGNVFEPKGCGEVEISGSPTEKAILSWAVKLGMKFDLAKSNSTILHVFPFNSEKKRGGVALKLADSSVHIHWKGAAEIVLGSCTQYLDSNGHLQSIDAEDFFKQAIDDMAARSLRCVAIAYRSYETDKVPSNEDDLAKWSLPEDELVLLAIVGIKDPCRPGVKDAVKLCTEAGVKVRMVTGDNIQTAKAIALECGILSSNEDLAEPNVIEGKRFRSLSENDREHVAKQITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRRESLITNIMWRNLLIQALYQVTVLLVLNFGGDQILRSHYSRARTHQLKNSLIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNHLFIGIVAITFVLQILIIEFLGKFTKTVRLDWKMWLISLAIGLFSWPLAVVGKLIPVSKTPLSRYMLKPLRRCWKPRGL 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1574 975 FunFam Calcium-transporting ATPase 139 260 - -
Prci12g1574 975 Pfam Cation transporting ATPase, C-terminus 775 951 IPR006068 -
Prci12g1574 975 SFLD C1.7: P-type atpase like 366 742 - -
Prci12g1574 975 CDD P-type_ATPase_Ca_PMCA-like 66 823 - -
Prci12g1574 975 Gene3D - 381 735 IPR023214 -
Prci12g1574 975 SUPERFAMILY HAD-like 382 795 IPR036412 -
Prci12g1574 975 PRINTS Sodium/potassium-transporting ATPase signature 127 147 - -
Prci12g1574 975 PRINTS Sodium/potassium-transporting ATPase signature 377 398 - -
Prci12g1574 975 PRINTS Sodium/potassium-transporting ATPase signature 503 521 - -
Prci12g1574 975 FunFam Calcium-transporting ATPase 583 735 - -
Prci12g1574 975 Pfam E1-E2 ATPase 161 362 - -
Prci12g1574 975 SFLD p-type atpase 366 742 IPR044492 -
Prci12g1574 975 Gene3D - 394 590 IPR023299 GO:0000166
Prci12g1574 975 SMART Cation_ATPase_N_a_2 40 114 IPR004014 -
Prci12g1574 975 ProSitePatterns E1-E2 ATPases phosphorylation site. 386 392 IPR018303 -
Prci12g1574 975 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 390 595 IPR023299 GO:0000166
Prci12g1574 975 Gene3D - 92 942 - -
Prci12g1574 975 FunFam Calcium-transporting ATPase 394 590 - -
Prci12g1574 975 PANTHER CATION TRANSPORTING ATPASE 18 953 - -
Prci12g1574 975 Pfam haloacid dehalogenase-like hydrolase 381 704 - -
Prci12g1574 975 SUPERFAMILY Calcium ATPase, transduction domain A 162 257 IPR008250 -
Prci12g1574 975 NCBIfam HAD-IC family P-type ATPase 321 407 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1574 975 NCBIfam HAD-IC family P-type ATPase 656 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1574 975 SUPERFAMILY Calcium ATPase, transmembrane domain M 41 954 IPR023298 -
Prci12g1574 975 FunFam Calcium-transporting ATPase 707 955 - -
Prci12g1574 975 Pfam Cation transporter/ATPase, N-terminus 42 109 IPR004014 -
Prci12g1574 975 FunFam Calcium-transporting ATPase 9 plasma membrane-type 238 408 - -
Prci12g1574 975 FunFam Calcium-transporting ATPase 92 149 - -
Prci12g1574 975 PRINTS P-type cation-transporting ATPase superfamily signature 690 709 - -
Prci12g1574 975 PRINTS P-type cation-transporting ATPase superfamily signature 384 398 - -
Prci12g1574 975 PRINTS P-type cation-transporting ATPase superfamily signature 583 594 - -
Prci12g1574 975 PRINTS P-type cation-transporting ATPase superfamily signature 714 726 - -
Prci12g1574 975 PRINTS P-type cation-transporting ATPase superfamily signature 208 222 - -
Prci12g1574 975 PRINTS P-type cation-transporting ATPase superfamily signature 605 615 - -
Prci12g1574 975 Gene3D - 63 260 - -
Prci12g1574 975 NCBIfam calcium-translocating P-type ATPase, PMCA-type 34 953 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1574 Prci-Chr12 33646581 33661268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1574 5 968 Primary Pumps ATPases AT3G21180 76.708 0.0 1490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1574 K01537 - gmx:100777845 1568.13