Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1573 ATGTTTAAGGATCATAACATTTCTGCTTTAGAGCGATATGGAGGGGTTAAAGGTTTATCGAGTTTACTACAATCAAGTCCCGAGAAGGGGATTAATGGGAGTAATGATGATCTATTAAGAAGGAGAACAGCATTTGGAACAAATACTTATCCTCGGAAAAAGGGGAGAAGTTTCTTTATGTTCCTATGGGAAGCTTGGCAAGATCTGACCCTAATCATATTGATAATAGCAGCTGCAGTATCATTAGTATTGGGAATAAAAACAGAGGGTCTGAAAGAAGGGTGGTACGATGGGGGAAGTATTGCTTTTGCAGTTTTTCTTGTCATTGTAGTTACAGCTGTTAGTGATTATCGGCAATCTCTGCAGTTTCAGAATTTGAATGCAGAAAAACAAAATATACAACTAGAGGTCATTAGAGGTGGTAGAATAGTAAAGATATCAATATTTGATGTTGTTGTTGGTGATGTTGTGCCTCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTTTTAATCACCGGCCACTCACTTGCCATTGATGAATCTAGCATGACTGGTGAAAGCAAGATTGTTCATAAAGACCATAAAGCACCATTTTTGATGTCTGGCTGCAAAGTAGCAGATGGAGTTGCTGCTATGCTGGTAACTGGAGTTGGTATCAATACTGAGTGGGGACTGTTGATGGCAAGTATCTCGGAAGATACTGGCGAAGAGACTCCATTGCAGGTACGTTTGAATGGAGTAGCGACTTTTATTGGTATAGCAGGGCTTTCAGTAGCTGCCATTGTGTTGGCTGTCCTCTTGGGAAGATACTTTTCTGGAAGTACAAAGGATCTGGATGGAAATGTTGAGTTTGTCGGTGGACAGACTAGCGTTAGTAGCGCAGTAGATGGGGTCATCAAAATTTTTACTATAGCTGTCACTATTGTGGTTGTTGCAGTACCTGAAGGTCTTCCCTTGGCTGTCACCTTAACCCTTGCTTACTCAATGCGAAAGATGATGGCTGACAAAGCCTTGGTTCGAAGGCTCTCAGCTTGTGAAACTATGGGTTCTGCTACAACAATTTGCAGTGATAAGACAGGAACATTGACATTGAATCAGATGACTGTAGTTGAGGCATATGTCGGGAAGAAGAATATCAAGCTACCGGAGGACTTACCAAATTTGCACTCAGAAGTTGTATCTCTAATAAATGAGGGTGTTGCACAGAATACTAGCGGAAATGTTTTTGAGCCCAAGGGTTGTGGAGAAGTAGAAATTTCGGGATCTCCTACAGAAAAGGCAATCCTTTCTTGGGCTGTCAAGTTGGGAATGAAATTCGATCTTGCCAAGTCAAATTCAACAATTCTACATGTCTTCCCCTTCAACTCGGAGAAAAAGCGAGGGGGTGTTGCGCTGAAGCTGGCGGACTCCAGTGTGCACATTCATTGGAAAGGAGCTGCGGAGATAGTTCTAGGCTCATGTACTCAATACCTTGATTCAAATGGTCATTTGCAATCAATTGATGCCGAGGACTTTTTCAAGCAGGCTATTGATGACATGGCTGCTCGCAGCTTGCGGTGTGTTGCCATTGCATATAGATCATATGAAACGGACAAAGTTCCCTCTAATGAGGATGATTTGGCCAAGTGGTCCTTGCCTGAGGATGAACTTGTTTTGCTTGCTATTGTTGGTATAAAGGATCCCTGTCGCCCTGGAGTCAAAGATGCTGTCAAATTATGCACTGAAGCTGGGGTTAAGGTACGCATGGTCACTGGAGACAATATTCAGACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTTTCTTCAAATGAAGATCTCGCTGAGCCAAATGTAATTGAAGGAAAGAGATTTCGTTCGTTATCTGAAAATGATAGGGAACATGTTGCTAAACAAATAACAGTTATGGGGAGATCTTCTCCAAATGACAAGCTTTTGCTTGTGCAAGCACTGCGCAAGGGAGGAGAAGTTGTTGCTGTCACAGGAGATGGCACTAATGATGCGCCTGCACTTCACGAGGCAGATATTGGTCTTTCAATGGGCATTCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATCATAATCCTGGATGATAACTTTGCATCGGTAGTGAAGGTTGTCCGATGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAGCTCACAGTTAATGTTGCAGCTCTTGTTATAAATGTTGTGGCTGCAATATCTTCTGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGGTCAACCTTATCATGGACACTCTTGGGGCCCTTGCATTGGCCACTGAACCACCAACGGACCATCTTATGCACAGATCACCAGTTGGCAGAAGGGAATCTCTTATAACAAATATTATGTGGAGGAACTTGCTCATACAGGCTTTATATCAAGTTACTGTTCTACTTGTTCTGAACTTCGGCGGCGATCAAATTCTGCGAAGTCATTACTCTAGAGCTCGTACACATCAACTGAAGAATTCTTTGATATTCAATGCATTTGTCCTCTGCCAAATATTCAATGAGTTCAACGCTCGGAAACCAGACGAAATGAATGTCTTCCGTGGAGTGACTAAGAACCACCTCTTCATTGGAATTGTTGCAATCACCTTTGTACTTCAGATACTCATCATCGAGTTCCTTGGAAAGTTCACGAAAACCGTGAGGCTTGATTGGAAGATGTGGCTTATTTCTCTTGCTATAGGGCTGTTCAGCTGGCCCCTGGCTGTAGTGGGAAAATTAATTCCTGTTTCAAAAACACCACTCTCACGGTACATGTTAAAGCCATTGAGGCGATGCTGGAAGCCTCGTGGTTTATGA 2844 0.4265 MFKDHNISALERYGGVKGLSSLLQSSPEKGINGSNDDLLRRRTAFGTNTYPRKKGRSFFMFLWEAWQDLTLIILIIAAAVSLVLGIKTEGLKEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRIVKISIFDVVVGDVVPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKAPFLMSGCKVADGVAAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIAGLSVAAIVLAVLLGRYFSGSTKDLDGNVEFVGGQTSVSSAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGKKNIKLPEDLPNLHSEVVSLINEGVAQNTSGNVFEPKGCGEVEISGSPTEKAILSWAVKLGMKFDLAKSNSTILHVFPFNSEKKRGGVALKLADSSVHIHWKGAAEIVLGSCTQYLDSNGHLQSIDAEDFFKQAIDDMAARSLRCVAIAYRSYETDKVPSNEDDLAKWSLPEDELVLLAIVGIKDPCRPGVKDAVKLCTEAGVKVRMVTGDNIQTAKAIALECGILSSNEDLAEPNVIEGKRFRSLSENDREHVAKQITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRRESLITNIMWRNLLIQALYQVTVLLVLNFGGDQILRSHYSRARTHQLKNSLIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNHLFIGIVAITFVLQILIIEFLGKFTKTVRLDWKMWLISLAIGLFSWPLAVVGKLIPVSKTPLSRYMLKPLRRCWKPRGL 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1573 947 Pfam Cation transporting ATPase, C-terminus 747 923 IPR006068 -
Prci12g1573 947 NCBIfam calcium-translocating P-type ATPase, PMCA-type 7 925 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci12g1573 947 ProSitePatterns E1-E2 ATPases phosphorylation site. 358 364 IPR018303 -
Prci12g1573 947 PANTHER CATION TRANSPORTING ATPASE 5 925 - -
Prci12g1573 947 FunFam Calcium-transporting ATPase 366 562 - -
Prci12g1573 947 Gene3D - 366 562 IPR023299 GO:0000166
Prci12g1573 947 Gene3D - 64 914 - -
Prci12g1573 947 Gene3D - 353 707 IPR023214 -
Prci12g1573 947 SMART Cation_ATPase_N_a_2 12 86 IPR004014 -
Prci12g1573 947 NCBIfam HAD-IC family P-type ATPase 293 379 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1573 947 NCBIfam HAD-IC family P-type ATPase 628 742 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1573 947 SUPERFAMILY Calcium ATPase, transduction domain A 134 229 IPR008250 -
Prci12g1573 947 FunFam Calcium-transporting ATPase 679 927 - -
Prci12g1573 947 Pfam haloacid dehalogenase-like hydrolase 353 676 - -
Prci12g1573 947 Pfam E1-E2 ATPase 133 334 - -
Prci12g1573 947 CDD P-type_ATPase_Ca_PMCA-like 38 795 - -
Prci12g1573 947 FunFam Calcium-transporting ATPase 111 232 - -
Prci12g1573 947 FunFam Calcium-transporting ATPase 9 plasma membrane-type 210 380 - -
Prci12g1573 947 Gene3D - 35 232 - -
Prci12g1573 947 FunFam Calcium-transporting ATPase 64 121 - -
Prci12g1573 947 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 362 567 IPR023299 GO:0000166
Prci12g1573 947 SUPERFAMILY HAD-like 354 767 IPR036412 -
Prci12g1573 947 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 926 IPR023298 -
Prci12g1573 947 FunFam Calcium-transporting ATPase 555 707 - -
Prci12g1573 947 SFLD C1.7: P-type atpase like 338 714 - -
Prci12g1573 947 Pfam Cation transporter/ATPase, N-terminus 14 81 IPR004014 -
Prci12g1573 947 SFLD p-type atpase 338 714 IPR044492 -
Prci12g1573 947 PRINTS P-type cation-transporting ATPase superfamily signature 577 587 - -
Prci12g1573 947 PRINTS P-type cation-transporting ATPase superfamily signature 662 681 - -
Prci12g1573 947 PRINTS P-type cation-transporting ATPase superfamily signature 686 698 - -
Prci12g1573 947 PRINTS P-type cation-transporting ATPase superfamily signature 180 194 - -
Prci12g1573 947 PRINTS P-type cation-transporting ATPase superfamily signature 555 566 - -
Prci12g1573 947 PRINTS P-type cation-transporting ATPase superfamily signature 356 370 - -
Prci12g1573 947 PRINTS Sodium/potassium-transporting ATPase signature 349 370 - -
Prci12g1573 947 PRINTS Sodium/potassium-transporting ATPase signature 99 119 - -
Prci12g1573 947 PRINTS Sodium/potassium-transporting ATPase signature 475 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1573 Prci-Chr12 33640119 33661268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1573 1 940 Primary Pumps ATPases AT3G21180 77.601 0.0 1476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1573 K01537 - gmx:100777845 1547.33