Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1567 ATGAAGCCGAGGATTTGTGAGTTGTGTAACCAAGAGGCATACCTGTATTGTGACTCTGATTCTGCGTTTCTCTGCTGGAAATGTGATGCCAAGGTTCACGATGCTAATTTTCTAGTTGCTCGACATTTCCGGGAGGTTCTCTGCTGCAATTGTAAGTGTTTCGCTGGAAGACAGGTCTCCGGTAGTGTGCCTCCGTTTGAAATCTCAACCTGTCCGTCTTGCTCGCCCGAGAATCACTCCGATGATGATGAGGACAATGATTGTTTATCCTCATCGTCGATTTCGGCCTGTGTTTCCAGTACCGAGTCCTGTTCTACAGGTCAGAAGAAGATTCAGCGTCGGATGGAGGAGACGGCGGTGTCGTCGAGTTCCGTCACGAACGAGAAGTGCACAGCGGAAGGGAAGAAGGATCCGGGACGGTGCGCGGCGGAGGAGGTTTTCGTGAATTGGAGCAGAAAGTTTGGGGTGAATAGTAATTGTGTGGCGTCGCTGGCGTCGCAAGCGGTGGGAAAACTAATGACGGTGGTTCCGTTTAGAGTAGCGGCGGCGACGTCGTTTTGGTTTGGTCTGAGATATTGCGGTGACGGGCGGTTACGTACGGTTCAGAACCTGAGGAAGTTGGAGGAAATGTCGAAAGTGCCAGGCAAGGTGATCATGGCGGCCGAGGAGAAACTGACACGTGTCCTGAGACCTAAAAGAGCGAGGCGTGACTTCGAGGAAGGCTGGGCCGAGTGTTAA 738 0.523 MKPRICELCNQEAYLYCDSDSAFLCWKCDAKVHDANFLVARHFREVLCCNCKCFAGRQVSGSVPPFEISTCPSCSPENHSDDDEDNDCLSSSSISACVSSTESCSTGQKKIQRRMEETAVSSSSVTNEKCTAEGKKDPGRCAAEEVFVNWSRKFGVNSNCVASLASQAVGKLMTVVPFRVAAATSFWFGLRYCGDGRLRTVQNLRKLEEMSKVPGKVIMAAEEKLTRVLRPKRARRDFEEGWAEC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1567 245 CDD Bbox1_BBX-like 5 44 - -
Prci12g1567 245 Pfam B-box zinc finger 2 34 IPR000315 GO:0008270
Prci12g1567 245 ProSiteProfiles Zinc finger B-box type profile. 1 42 IPR000315 GO:0008270
Prci12g1567 245 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 103 - -
Prci12g1567 245 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1567 Prci-Chr12 33553260 33554418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1567 5 244 C2C2-CO-like Transcription Factor Family AT3G21150 37.805 9.92e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci12g1567 zf-B_box 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1567 - - pcin:129288868 501.901