Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1521 ATGCGCCACAACCTTTCTGGGTTGTGGATCTCTCTGCTCGCGGTCTTCACTACCGCAGTTCATTGCAAGACTAACTCCCAGGATGTTTCAGCCCTCAATGGGATAACCAGCTTAACATCTCATTCACAATTGGAAGGCTGGAAATCAAGTGAGGGTGATCCTTGTGGCGACTCGTGGGAAGGAATCAAATGCTCAGGCTCGTCAGTCACAGAAATAAATTTGTCTGGCCTGGGACTTAGTGGATCAATGGGCTACGAGCTGTCAAACTTGGCATCGGTTACCTACTTTGACTTGAGCAACAACAACCTTCGTGGTGATATACCGTACCAACTTCCACCTAATGCTCATTACATTGATCTTTCCAAGAATAGCTTCACTGGAGTGGTTCCTTTTTCCATTTCTCAGATGACCAACCTTAATACCCTAAATCTTGCGCATAATCAACTCAATAATCAGTTGGGTGATATGTTTGGGAAACTCACTAAACTCAAACTACTGGATTTATCATTTAATTCACTATCAGGAAACTTGCCTCAAAGTCTTAAATCTCTCTCAGGCCTCAAAAAGTTGCATCTGCAAAATAATCAATTCTCAGGTTCAATAAATGTGCTTGCGAACCTTCCACTTGAGGATTTGAATGTTGAAAATAACAAATTTTCTGGTTGGATCCCGGCAGAGTTAAAGGATATAAGTAGCTTGCACACTGGAGGAAACTCTTGGTCAACATGGCCAGCTCCTCCTCCTCCTCCTGGCACACCACCACTCAAACATTCTGAACAGGGAAAAGGGAAACCTGCTGTTATTGGAATTGTTCTAGGAAGCATAGCTTTGGTTTTGCTCATAGTAATTGTGATTGTTGTTGCTATTGTTAAAAGAAGATCATCTCCGCCTCCCTCAAAATTTCTAGATGAAGAGCATAACCATCACAAATCTTCTACGCCTCTTGCATCCAAGGAATCATCAGAAAAAGTATCTGAATTTAAGCCTCCAGATTCTGCTTCAATTGACATAAAGGCCTTACAAAAAGTTCCATCATCTGGTGCAAGGTCATCAGCATCTGATCATGTACAAACCTTTGATGATAACGAGATTGCAAATCGTCTAAATGCTGTAAGAAGCAACTCGGTTCGTGCTGTTCATTTTCCATTTGCAGATCTGCGGGCTGCTACTGGTAATTTTGCATCAAGTCGTCTTCTCGGTGAAGGATCCATTGGATGTGTTTACCGGGCAAAATATGCTGATGGAAAGGTTTTAGCTGTGAAAAAACTTGACTCCACCCATTTCCATGGCAGCTCTCCAGAGGACTTCTCTCAGATTTTATTCAAAATTTCCCAGGTTCACCACCCGAATATTGCTGAGCTTGTTGGTTATTCTTCAGAACAAGGAGACAACATGTTAGTATATGAGTGTTTCCAAAATGGCTCTCTTCATGAATTTTTACATGTGTCAGACGACTTCAGCAAGCCACTAACATGGAACACTAGAGTCAAAATTGCACTAGGCACCGCTCTAGCAGTTGAGTACCTGCATGAAATTTGTTCTCCATCTTTAGTTCACAAGAACATCAAGTCTTCCAACATACTGCTTGACAATGAACTCCATCCCCATCTCTCAGACTATGGTTTGGCATCCTTCTATCAGCGCACTAGTCAAAATCTTGGGGCAGGATATAATGCACCTGAGTGTTCAAAACCTTCAGCCTATACCCTAAAGAGTGATGTGTTTAGTTTTGGGGTAGTCATGCTGGAACTGTTAACTGGTCGAAAGCCTTTGGACAGGTCAAAGCCAAAAGCAGAACAATGTCTTGTTCGTTGGGCCGCCCCTCAGCTTCATGACATTGATGCATTGGAAAAAATGGTGGATCCTGCCTTACGAGGACTTTACCCTCCTAAATCACTCTCAAGGTTTGCTGACATCATCGCTCTCTGTGTTCAGCCTGAGCCGGAATCTCGGCCACCGATGTCGGAAGTGGTTCAGGCATTGGTAAGACAAATTCAGCATTCAAATATGAACATGAGAGAAGATATGGATGGCTGGGATGGATGA 2046 0.4296 MRHNLSGLWISLLAVFTTAVHCKTNSQDVSALNGMXTSLTSHSQLEGWKSSEGDPCGDSWEGIKCSGSSVTEINLSGLGLSGSMGYELSNLASVTYFDLSNNNLRGDIPYQLPPNAHYIDLSKNSFTGVVPFSISQMTNLNTLNLAHNQLNNQLGDMFGKLTKLKLLDLSFNSLSGNLPQSLKSLSGLKKLHLQNNQFSGSINVLANLPLEDLNVENNKFSGWIPAELKDISSLHTGGNSWSTWPAPPPPPGTPPLKHSEQGKGKPAVIGIVLGSIALVLLIVIVIVVAIVKRRSSPPPSKFLDEEHNHHKSSTPLASKESSEKVSEFKPPDSASIDIKALQKVPSSGARSSASDHVQTFDDNEIANRLNAVRSNSVRAVHFPFADLRAATGNFASSRLLGEGSIGCVYRAKYADGKVLAVKKLDSTHFHGSSPEDFSQILFKISQVHHPNIAELVGYSSEQGDNMLVYECFQNGSLHEFLHVSDDFSKPLTWNTRVKIALGTALAVEYLHEICSPSLVHKNIKSSNILLDNELHPHLSDYGLASFYQRTSQNLGAGYNAPECSKPSAYTLKSDVFSFGVVMLELLTGRKPLDRSKPKAEQCLVRWAAPQLHDIDALEKMVDPALRGLYPPKSLSRFADIIALCVQPEPESRPPMSEVVQALVRQIQHSNMNMREDMDGWDG 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1521 682 SUPERFAMILY Protein kinase-like (PK-like) 376 663 IPR011009 -
Prci12g1521 682 Gene3D Phosphorylase Kinase; domain 1 354 471 - -
Prci12g1521 682 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 359 471 - -
Prci12g1521 682 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 252 - -
Prci12g1521 682 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 472 676 - -
Prci12g1521 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 669 IPR046959 -
Prci12g1521 682 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Prci12g1521 682 SUPERFAMILY L domain-like 28 243 - -
Prci12g1521 682 MobiDBLite consensus disorder prediction 239 263 - -
Prci12g1521 682 MobiDBLite consensus disorder prediction 298 331 - -
Prci12g1521 682 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Prci12g1521 682 ProSiteProfiles Protein kinase domain profile. 394 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1521 682 MobiDBLite consensus disorder prediction 298 327 - -
Prci12g1521 682 Gene3D Ribonuclease Inhibitor 22 256 IPR032675 -
Prci12g1521 682 Pfam Protein tyrosine and serine/threonine kinase 397 662 IPR001245 GO:0004672|GO:0006468
Prci12g1521 682 Gene3D Transferase(Phosphotransferase) domain 1 472 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1521 Prci-Chr12 32812272 32832213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1521 1 677 Strubbelig Receptor Gene Family AT1G78980 59.565 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Prci12g1521 PK_Tyr_Ser-Thr 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1521 - - qsa:O6P43_028034 941.799