Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1514 ATGAAACTACAGGCGCCAATTCCGGGACAAATGTCAGGCCAGGTACCTAATCAATCAGGGTCCCAGTTGCCTGGACTAACCCAGCCGAATCGAAATGCCATCCCTCAGATGCCAACTTTAGGCGGTGTTCCCCGATCAACCAGTAATATGGACCCTGAATTTCTAAGAGCACGCTTGTTTATTCAAGAGAAGATCTATGATATGTTATTGCAGCGGCAACAGCTGCCAGTAATGGAAGTGCAGAGAAGAAAGTTCAAGGATCTTGCTAAACGCCTGGAGGAAGGCATGTTAAAAGCTGCACCATCTAAGGAGGAGCACTTGAACTTGGGTACACTAGAGAGCCGTCTGCTTAATTTCTCCAAATCGTCATCTATGAATAATAACCAACAATATACCCAGCATACTAGCTCTTCTTCAGTAGGTACGATGATACCAACACCTGGTATGGCACATGTGAATTCAAACATGGCAGTTACATCTTGTGTAGATGCCTCAATGATTGTTGCCCCTGGATGTAATAGTATGGCATCTCCATCTGTGAATAGTGCAAGCATGTTTCCTACAGGTGGCTTGCATGGGAATTCCTTAACTAGATCTGATGGTTTGTCTAATGGCTATCAGCCATCATCAACCAGCTTTTCAATTGGTTCTGGGGGAACCATGTCATCAATGGGGGTGCAGAGAATCACAAGCCAGATGATTCCCACTCCTGGTTTTAATGGCAGCAATAACTCATACATGAATATAGAATCTTCTGATAATAGTGCTGTCTTTTCCAGTGTTGAATCCTCGACGATGTCACAGCCTCTGCAGCAGAAACAGAATTTTGGGGGCCAAAACAATAATGTGATGCAGAACCTTGGCAACCAAATGGGTAGTGGAATGAGATCTGGTTTACAGCAAAAATCTATTGCATACTCAAATGGAGCCATGGGTAGCGGGTTAGGTTTGATTGCAAACAATAGGCAACTTACAAATGAATCTGGCTTTGGTGATGCCTATGCCACAACCTATGTGAATTCCCCTCAACACTCACAGCAGCACTTTGATCAAAATCAGCAACCGCCAGTGCATGGTGATGGATATGGATTAAATAATGTTGACTCATATGCATCTGGAAACTTTTATACATCTGCAACATCTTCTGGATCTATGATGAGCAGTCAGAACTTGAACTCAGTAAAATTGCCTGCAATATCCCAAACCAACTCTCTCATAAGTAGTCATTCGAATTTACATGGTATGCAGCAGGATGCTCATCTAAAGTCTCAAGCTATGAATCGGTTGGAGAAGTTGAATTTTCAGTCTTCTTTCACTTCCAAAGATAGCCTTCTGGATCCTCAACAGCAATATCTGCAACATTCCCAACAATTTCAACAGCCAGAGCAGTATGCTCCACAGCAATTTGAACAGTCAGAGCAGTATGCCCAGAAGCAATTTCAATTTAAGCTGCAAAGTCAGCAGCCCCAGCATTTGGTCAAAAGTGATGCCTTCAGTCAGTCTCATATCTCTTCCAATTTAGAAGTCCAAGTGAAGTCTGAGCCTGTAATTGATCACCACAAAGAAGTCTTCAGTTCACAGGTTTCTGAACAGTTTAATATTTCTGAGATGCAAAACAAGATGCAAAAGAACTCTAATGATAGTTGTTTGGGGGATGCCCAACATCTTTCTTTTCCAAATAGTCAGAGTGATTTATCTGCAACAACAGCTCAAAACTCACATCAAATGTTGCACCCGCATCAAATGGTTTCAGAGTCTGAAAATAATTTTAGTTGTCTTTCAGTTGGGACACAATCTAAATCAGCACTTCTAAATCAATGGAATTCTCAATCGCAAGGTGGTAACCACATACCAGGGAATATGTTGCATGAGCAACATCTCCACATGGATTTCCATCAGAGAATATCAAGGCAAGATGAAGCTCAGTGCAATAATTTATCATCAGATGGAAATGTTATTGGTCAAGCTGTTTCTTCTAGAGGCACTGAACCACTTGACTCAAGTGTTAGTATTAAGAAAGCACATAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCTCGACGGTGTCCTGCCCCAGAAGGACGATGCCAAGAACGTTATTGTTATAGTGCTCAGAAGTTATGCAGACACATTGATGGATGCAACCTGCCTCATTGCTCATATCCCCGCTGTCATCATACCAGGCTATTGCTAATTCATTTTAGAAACTGCAAAGATCCATGTTGCCCAGTTTGTGTTTTTGTTCGAAATTACAGGCGCTCTTTTCAAGTCAAGTCCCAGACTCGGCCAGATTCTGATTCAGGAGTGCCAGTTGCAGCAAATGGATCTTGTAAACCATATAATTCTGTGGTTCCATCACCTAGATTGATCCAAAAACCTCTACCCATTATTGAAACTTCAGATGACCTGCGGCCATCTTTAAAACGTATGAAAATTGAGCAGTGTACCCAGTCCTTTAGTTTGGAGAATGAAAACTCTACTGTGTCAGTTTTGGCAAACTGTGAATCTAATGTTTCCAAGGATGCCCCGTGCCAAGACTATATCCATGGTGATATGTCAATGTCAATTAAATCTGAGCTTACAGAAGTTAAGGCTGAAGGTCTAGTGCATTCAACACCTGCAAATCCTTGTGAAATGAAAATAAATGATGTGGAGGACAGATGGCCTGGTGGTGAACCTGTCACATATGATGAACCTGTCTCTTTAGCTAGGCCAGAAAATATCAAAACTGAGAAAGAAACTGGACAAGATCACCCAGAAAACCTTAACCAGCCATCAGAAAATTTTGGAGGGACAAAGTCTGGTAAGCCTAAAATAAAGGGGGTCTCGTTGACTGAACTATTCACTCCAGAACAAGTCAGGGAGCACATCACTGGCCTAAGACAATGGGTTGGCCAGAGCAAAGCGAAGGCTGAAAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACATTTGAACCACCACCTATTTATTGCTCAACTTGTGGTGGTCGCATTAAACGGAACGCTATGTATTATACCATGGGTACTGGCGATACACGGCATTATTTTTGTATTCCATGCTATAACGAGGCACGTGGAGACAGCATTTTTGTCGATGGAACTGCCATTCCTAAGGCGAGGCTGGAGAAAAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACACCAAATTTGTGCACTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAGTACACTTGCCCTAATTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAACCATTACCCCAAAGTGCTGTTCTTGGGGCTAAGGATTTGCCTAAAACTATTCTCAGTGAGCAAATACAGCAACGGTTGTCTAGGAGACTAGAACAAGAGAGACAAGAGAGGGCAAGGCTTCAAGGAAAAAGTCGCGATGAGGTGCCTGGGGCTGAAGAACTTGTTGTAAGAGTGGTGTCATCTGTGGACAAGAAGTTAGAAGTGAAACAACGATTTTTGGAAATTTTCCGGGAAGAAAATTATCCAACAGAATTCCCATATAAATCTAAGGTAGTTTTGTTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTTTTTGGCATGTATGTTCAAGAATTTGGATCTGAATGCCAGTTCCCTAATCAGCGTCGGGTATATCTTTCATACCTTGATTCTGTGAAGTATTTTAGGCCTGAAGTTAAAGCAGTGACTGGAGAGGCTCTTCGGACGTTTGTTTATCATGAAATCTTGATTGGATACCTCGAATATTGTAAGAAACGTGGTTTTACTAGCTGCTATATTTGGGCCTGTCCTCCATTGAAGGGTGAAGATTATATTTTATATTGTCATCCGGAAATTCAGAAAACTCCAAAATCGGATAAGCTCCGAGAATGGTACTTGTCAATGTTAAGAAAAGCTTCCAAGGAGAATATTGTGGTCGATCTTACCAACTTGTACGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCTAAGGTTACTGCTGCAAGGCTTCCTTATTTTGATGGTGACTATTGGCCCGGGGCTGCTGAGGATTTGATTTATCAGCTTAACCAAGAAGAAGATGGCAGAAAACTGAATAAGAAAGGAACAACCAAAAAAACCATAACAAAAAGGGCTTTAAAGGCATCTGGTCAGTCAGATCTCTCTGGAAATGCTTCAAAAGATCTACTCCTAATGCATAAACTTGGCGAAACCATTAGCCCCATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCAGTCATTGTTGTATTTTAATGGTATCAGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATATGTGATAAGTGTTATGAAGTTGAACTAAAGCGTGAAGAAAGAGAAAGGCATCCTATTAATCATAGGGAGAAACATGCTCTTTACGGAATTGAAATTTCTGATGTACCAGCTGATACAAAGGACAAAGATGAGATTCTTGAAAGTGAATTCTTTGACACTAGACAGGCATTTCTTAGTCTGTGTCAGGGAAACCACTATCAATATGATACTTTGAGACGGGCCAAGCATTCATCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCTTTTGTGACAACTTGTAATATATGCCATCTTGACATTGAAACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCTGATTATGATGTGTGCAATGCGTGTTATCAAAAGGATGGAGGTGTTGATCATCCTCATAAGTTGACAAATCATCCGTCTGTGGCTGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTGTTGCAGTTGCGGAAAATGCTTGATCTTCTCGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAGTATCCCAATTGTCGCAAAGTGAAGGGGCTCTTCCGCCATGGGATGCAATGTAAAACACGTGCCTCCGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATCTGCTGCAACTCCATGCTCGTGCTTGCAAAGAATCTGAGTGCCACGTACCACGTTGCAGAGATCTGAAAGAACATTTAAGGAGGTTACAGCAACAATCGGACTCTCGACGAAGAGCAGCCGTGATGGAAATGATGAGACAGAGAGCTGCCGAAGTTGCCAGCAATGCAGGATAA 5211 0.4203 MKLQAPIPGQMSGQVPNQSGSQLPGLTQPNRNAIPQMPTLGGVPRSTSNMDPEFLRARLFIQEKIYDMLLQRQQLPVMEVQRRKFKDLAKRLEEGMLKAAPSKEEHLNLGTLESRLLNFSKSSSMNNNQQYTQHTSSSSVGTMIPTPGMAHVNSNMAVTSCVDASMIVAPGCNSMASPSVNSASMFPTGGLHGNSLTRSDGLSNGYQPSSTSFSIGSGGTMSSMGVQRITSQMIPTPGFNGSNNSYMNIESSDNSAVFSSVESSTMSQPLQQKQNFGGQNNNVMQNLGNQMGSGMRSGLQQKSIAYSNGAMGSGLGLIANNRQLTNESGFGDAYATTYVNSPQHSQQHFDQNQQPPVHGDGYGLNNVDSYASGNFYTSATSSGSMMSSQNLNSVKLPAISQTNSLISSHSNLHGMQQDAHLKSQAMNRLEKLNFQSSFTSKDSLLDPQQQYLQHSQQFQQPEQYAPQQFEQSEQYAQKQFQFKLQSQQPQHLVKSDAFSQSHISSNLEVQVKSEPVIDHHKEVFSSQVSEQFNISEMQNKMQKNSNDSCLGDAQHLSFPNSQSDLSATTAQNSHQMLHPHQMVSESENNFSCLSVGTQSKSALLNQWNSQSQGGNHIPGNMLHEQHLHMDFHQRISRQDEAQCNNLSSDGNVIGQAVSSRGTEPLDSSVSIKKAHRNQQRWLLFLLHARRCPAPEGRCQERYCYSAQKLCRHIDGCNLPHCSYPRCHHTRLLLIHFRNCKDPCCPVCVFVRNYRRSFQVKSQTRPDSDSGVPVAANGSCKPYNSVVPSPRLIQKPLPIIETSDDLRPSLKRMKIEQCTQSFSLENENSTVSVLANCESNVSKDAPCQDYIHGDMSMSIKSELTEVKAEGLVHSTPANPCEMKINDVEDRWPGGEPVTYDEPVSLARPENIKTEKETGQDHPENLNQPSENFGGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGGRIKRNAMYYTMGTGDTRHYFCIPCYNEARGDSIFVDGTAIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPKTILSEQIQQRLSRRLEQERQERARLQGKSRDEVPGAEELVVRVVSSVDKKLEVKQRFLEIFREENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLNQEEDGRKLNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEVELKREERERHPINHREKHALYGIEISDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGVDHPHKLTNHPSVADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVASNAG 1736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1514 1736 SMART PHD_3 1004 1103 IPR001965 -
Prci12g1514 1736 MobiDBLite consensus disorder prediction 10 27 - -
Prci12g1514 1736 Pfam Histone acetylation protein 1159 1376 IPR013178 GO:0004402|GO:0006355|GO:0016573
Prci12g1514 1736 SUPERFAMILY TAZ domain 1620 1703 IPR035898 -
Prci12g1514 1736 PANTHER CBP/P300-RELATED 84 402 IPR013178 GO:0004402|GO:0006355|GO:0016573
Prci12g1514 1736 ProSitePatterns Zinc finger PHD-type signature. 1031 1102 IPR019786 -
Prci12g1514 1736 FunFam Histone acetyltransferase HAC1 1557 1608 - -
Prci12g1514 1736 SUPERFAMILY RING/U-box 1418 1488 - -
Prci12g1514 1736 ProSiteProfiles Zinc finger TAZ-type profile. 1618 1701 IPR000197 -
Prci12g1514 1736 Pfam PHD-finger 1061 1103 IPR019787 -
Prci12g1514 1736 ProSiteProfiles Zinc finger ZZ-type profile. 1438 1501 IPR000433 GO:0008270
Prci12g1514 1736 Pfam Zinc finger, ZZ type 1560 1602 IPR000433 GO:0008270
Prci12g1514 1736 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1059 1103 IPR013083 -
Prci12g1514 1736 SUPERFAMILY FYVE/PHD zinc finger 1064 1104 IPR011011 -
Prci12g1514 1736 ProSitePatterns Zinc finger ZZ-type signature. 1563 1590 IPR000433 GO:0008270
Prci12g1514 1736 SMART zz_5 1437 1481 IPR000433 GO:0008270
Prci12g1514 1736 SMART zz_5 1557 1603 IPR000433 GO:0008270
Prci12g1514 1736 SUPERFAMILY RING/U-box 1539 1607 - -
Prci12g1514 1736 MobiDBLite consensus disorder prediction 539 568 - -
Prci12g1514 1736 MobiDBLite consensus disorder prediction 913 938 - -
Prci12g1514 1736 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1120 1556 IPR031162 GO:0004402
Prci12g1514 1736 SMART TAZ_2 672 750 IPR000197 -
Prci12g1514 1736 SMART TAZ_2 1621 1699 IPR000197 -
Prci12g1514 1736 Gene3D - 1434 1495 IPR043145 -
Prci12g1514 1736 Gene3D - 1557 1608 IPR043145 -
Prci12g1514 1736 MobiDBLite consensus disorder prediction 1 27 - -
Prci12g1514 1736 SUPERFAMILY TAZ domain 675 754 IPR035898 -
Prci12g1514 1736 Pfam TAZ zinc finger 1628 1698 IPR000197 -
Prci12g1514 1736 Pfam TAZ zinc finger 679 747 IPR000197 -
Prci12g1514 1736 Gene3D - 998 1058 IPR038547 -
Prci12g1514 1736 Gene3D TAZ domain 669 770 IPR035898 -
Prci12g1514 1736 CDD PHD_HAC_like 1030 1102 - -
Prci12g1514 1736 FunFam Histone acetyltransferase HAC1-like protein 1615 1732 - -
Prci12g1514 1736 ProSiteProfiles Zinc finger TAZ-type profile. 669 750 IPR000197 -
Prci12g1514 1736 SMART KAT11_2 1153 1450 IPR013178 GO:0004402|GO:0006355|GO:0016573
Prci12g1514 1736 FunFam Histone acetyltransferase of the CBP family 12 1434 1493 - -
Prci12g1514 1736 ProSiteProfiles Zinc finger ZZ-type profile. 1558 1611 IPR000433 GO:0008270
Prci12g1514 1736 Gene3D TAZ domain 1615 1732 IPR035898 -
Prci12g1514 1736 Coils Coil 1136 1156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1514 Prci-Chr12 32643836 32655819 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Prci12g1514 HAT_KAT11 1.3e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1514 K04498 - gmx:100809207 2675.58