Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1505 ATGAAACTACAGGCGCCAATTCCAGGACAAATGTCAGGCCAGGTACCTAATCAATCAGGGTCCCAGCTGCCTGGACTGACCCAGCCGAATCGAAATGCCATCCCTCAGATGCCAACTTTAGGCGGTGTTCCCCGATCAACCACTAATATGGACTCTGAATTTCTAAGAGCACGCGTGTTTATTCAAGAGAAGATCTATGATATGTTATTGCAGCGGCAACAGCCGCCAGTAGTGGAACTGCAGAGAAGAAAGTTCAAGGATCTTGCTAAACGCCTGGAGGAAGCCATGTTAAAAGCTGCAACATCTAAGGAGGAGTACTTGAACTTGGGTACACTAGAGAGCCGTCTGCTTAATTACTGCAGACCGCCATCTGTGAATAATAACCAACAATATACCCAGCATACTAGCTCTTCTTCAGTAGGTACAATGATACCAACACCTGGTATGGCACATGTGAATTCAAACATGGCAGTTACATCTTCTGTAGATGCCTCAATCATTGTTGCCCCTGGATGTAATAGCATGGCATCTCCATCTGTGAATAGTGCAAGCATGTTTCCTACAGGGGGTTTGCATGGGAATTCCTTAACTAGATCTGATGGTTTGTGTAATGGCTATCAGCCATCATCAACCAGCTTTTCAATTGGTTCTGGGGGAACCATGTCATCAATGGGTGTGCAGAGAATCACAAGCCAGATGATTCCCACTCCTGGTTTTAATGGCAGCAATAACTCATACATGAATATGGAATCTTCTGATAATAGTGGTGTCTTTTCCAGTGTTGAATCCTCAACAATGTCACAACCTCTGCAGCAGAAACAGAATTTTGGGGGCCAAAACAATAATGTGATGCAGAACCTTGGCAACCAAATGGATAGTGGAATGAGATCTGGTTTACAGCAAAAATCTATTGCATACTCAAATGGAGCCATGGGTAGCAGGTTAGGTTTGATTGGAAACAATAGGCAACTTACAAATGAATCTGGCTTTGGTGATGCCTATGCCACAACTTGTGTGAATTCCCCTAAACACTTACAGCAGCACTTTGATCAAAATCAGCAACCGCCAGTGCATGGTGATGGATATGGATTAAATAATGTTGACTCATATGCATCTGGAAACTTTTATACATCTGCAACATCTTCTGGATCTATGATGAGCAGTCAGAACTTGAACTCAGTAAAATTGCCTGCAATATCCCAAACCAACTCTCTCATAAGTAGTCATTCGAATTTACATGGTATGCAGCAGGATGCTCATCTAAAGTCTCAATCTATGAATCGGTTGGAGAAGTTGAATTTTCAATCTTCTTTCACTTCAAAAGATGGCCTTCTGGATCCTCAACGGCAATATCTGCAACATTCCCAACAATTTCAACAGCCAGAGCAGTATGCCCAGAAGCAATTTCAATTTAAGCTGCAAAGTCAGCAGCCCCAGCATATGGTCAAAAGTGATGCCTTCAGTCAGTCTCATATCCCTTCCAATTTAGAAGTCCAAGTGAAGTCTGAGCCTGTAATTGATCACCACAAAGAAGTCTTTAGTTCACAGGTTTCTGAACAGTTTAATATTTCTGAGATGCAAAACAAGATGCAACAGAACTCTAATGATAGTTGTTTGGGGGATGCCCAACATCTTTCTTTTCCAAATAGTCAGAGTGATTTATCTGCAGCAACAGCTCAAAACTCACATCAAATGTTGCACCCGCATCAAATGGTTTCAGAGTCCGAAAATAATTTTAGTTGTCTTTCAGTTGGGACACAATCTAAATCAGCACTTCTAAATCAATGGAATTCTCAATCGCAAGGTGGTAACCACATACCAGGGAATATGTTGCATGAGCAACATCTCCACATGGATTTCCATCAGAGAATATCAAGGCAAGATGAAGCTCAGTGCAATAATTTATCATCAGATGGAAATGTTATTGGTCAAGCTGTTGCTTCTAGAGGCACTAAACCCCTTGACTCAAGTGTTAGTATTAAGAAAGCACATAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCTCGACGGTGTCCTGCCCCAGAAGGACGATGCCAAGAACGTTATTGTTATAGTGCTCAGAAGTTATGCAGACACATTGATGGATGCAACCTGCCTCATTGCTCATATCCCCGCTGTCATCATACCAGGCTATTGCTAATTCATTTTAGAAACTGCAAAGATCCATGTTGCCCAGTTTGTGTTTTTGTTCGAAATTACAGGCGCTCTTTTCAAGTTAAGTCCCAGACTCGGCCAGATTCTGATTCAGGAGTGCCAGTTGCAGCAAATGGATCTTGTAAATCATACAATTCTGTGGTTCCATCACCTAGATTGATCCAAAAACCTCTACCCGTTATTGAAACTTCAGATGACCTGCAGCCATCTTTAAAACGTATGAAAATTGAGCAGTGTACCCAGTCCTTTAGTTTGGAGAATGAAAACTCTACTGTGTCAGTTTTGGCAAACTGTGAATCTAATGTTTCCAAGGATGCCCCGTGCCAAGACTATATCCATGGTGATATGTCAATGTCAATTAAGTCTGAGCTCACAGAAGTTAAGGCTGAAGGTCCAGTGCATTCAACACCTGCAAATCCTTGTGAAATGAAAATAAATGATGTGGAGGACAGATGGCCTGGTGGTGAACCTGTCACATATGATGAACCTGTCACTTTATCTAGGCCAGAAAATATCAAAACTGAGAAAGAAACTGGACAAGATCAGCCAGAAAACCTTAACCAGCCATCAGAAAATTTTGGAGGGACGAAGTCTGAACCTAAAATAAAGGGGGTCTCGTTGATTGAACTATTCACTCCAGAACAAGTCAGGGAACACATCACTGGCCTAAGACAATGGGTTGGCCAAAGCAAAGCGAAGGCTGAAAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACATTTGAACCACCACCTATTTATTGCTCAACTTGTGGTGCTCGCATTAAACGGAACGCTATGTATTATACCATGGGTACTGGCGATACACGGCATTATTTTTGTATTCCATGCTATAACGAGGCACGTGGAGACAGCATTTTTGTCGATGGAACTGCCATTCCTAAGGCGAGGCTGGAGAAAAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACACCAAATTTGTGCACTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAGTACACTTGCCCTAATTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAACCATTACCCCAAAGTGCTGTTCTTGGGGCTAAGGATTTGCCTAAAACTATTCTCAGTGAGCAAATACAGCAACGGTTGTCTAGGAGACTAGAACAAGAGAGACAAGAGAGGGCAAGGCTTCAAGGAAAAAGTCGCGATGAGGTGCCTGGGGCTGAAGAACTTGTTGTAAGAGTGGTGTCATCTGTTGACAAGAAGTTAGAAGTGAAACAACGATTTTTGGAAATTTTCCGGGAAGAAAATTATCCGACAGAATTCCCCTATAAATCAAAGGTAGTTTTGTTGTTTCAAAAGATTGAAGGCGTGGAAGTATGCCTTTTTGGCATGTATGTTCAAGAATTTGGATCTGAATGCCAGTTCCCTAATCAGCGTCGGGTTTATCTTTCATACCTTGATTCTGTGAAGTATTTTAGGCCTGAAGTTAAAGCAGTGACTGGAGAGGCTCTTCGGACGTTTGTTTATCATGAAATCTTGATTGGATACCTTGAATATTGTAAGAAACGTGGTTTTACTAGCTGCTATATTTGGGCCTGTCCTCCATTGAAGGGTGAAGATTATATTTTATATTGTCATCCGGAAATTCAGAAAACTCCAAAATCTGATAAGCTCCGAGAATGGTACTTATCAATGTTAAGAAAAGCTTCGAAGGAGAATATTGTGGTCGATCTTACCAACTTGTACGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCTAAGGTTACTGCTGCAAGACTTCCTTATTTTGATGGTGACTATTGGCCTGGGGCTGCTGAGGATTTGATTTATCAGCTTAACCAAGAAGAAGATGGCAGAAAACTGAATAAGAAAGGAACAACCAAAAAAACCATAACAAAAAGGGCTTTAAAGGCATCTGGTCAGTCAGATCTCTCTGGAAATGCATCAAAAGATCTGCTCCTAATGCATAAACTTGGCGAAACCATTAGCCCCATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCAGTCATTGTTGTATTTTAATGGTATCAGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATATGTGATAAGTGTTATGAAGTTGAACTAAAGCGTGAAGAAAGAGAAAGGCATCCTATTAATCATAGGGAGAAACATGCCCTTTACCGAATTGAAATTTCTGATGTACCAGCTGATACAAAGGACAAAGATGAGATTCTTGAAAGTGAATTCTTTGACACTAGACAGGCATTTCTGAGTCTGTGTCAGGGAAACCACTATCAATATGATACTCTGAGACGGGCCAAGCATTCATCAATGATGGTTCTCTATCATCTTCATAATCCAACTGCTCCTGCTTTTGTGACAACTTGTAATATATGCCATCTTGACATTGAAACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCTGATTATGATGTGTGCAATGCGTGTTATCAAAAGGATGGAGGCGTTGATCATCCTCATAGGTTGACAAATCATCCATCTGTGGCTGATCGTGATGCTCAGAACAAAGAAGCAAGGCAACTTCGAGTGTTGCAGTTGCGGAAAATGCTTGATCTTCTCGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAGTATCCAAATTGTCGCAAAGTGAAGGGGCTCTTCCGCCATGGGATGCAATGTAAAACACGTGCCTCCGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATCTGCTGCAACTCCATGCTCGTGCTTGCAAAGAGTCTGAGTGCCACGTACCACGTTGCAGAGATCTGAAGGAACATTTAAGGAGGTTACAGCAACAATCGGACTCTCGACGAAGAGCAGCCGTGATGGAAATGATGAGACAGAGAGCTGCTGAAGTTGCCAGCAATGCAGGATAA 5175 0.4199 MKLQAPIPGQMSGQVPNQSGSQLPGLTQPNRNAIPQMPTLGGVPRSTTNMDSEFLRARVFIQEKIYDMLLQRQQPPVVELQRRKFKDLAKRLEEAMLKAATSKEEYLNLGTLESRLLNYCRPPSVNNNQQYTQHTSSSSVGTMIPTPGMAHVNSNMAVTSSVDASIIVAPGCNSMASPSVNSASMFPTGGLHGNSLTRSDGLCNGYQPSSTSFSIGSGGTMSSMGVQRITSQMIPTPGFNGSNNSYMNMESSDNSGVFSSVESSTMSQPLQQKQNFGGQNNNVMQNLGNQMDSGMRSGLQQKSIAYSNGAMGSRLGLIGNNRQLTNESGFGDAYATTCVNSPKHLQQHFDQNQQPPVHGDGYGLNNVDSYASGNFYTSATSSGSMMSSQNLNSVKLPAISQTNSLISSHSNLHGMQQDAHLKSQSMNRLEKLNFQSSFTSKDGLLDPQRQYLQHSQQFQQPEQYAQKQFQFKLQSQQPQHMVKSDAFSQSHIPSNLEVQVKSEPVIDHHKEVFSSQVSEQFNISEMQNKMQQNSNDSCLGDAQHLSFPNSQSDLSAATAQNSHQMLHPHQMVSESENNFSCLSVGTQSKSALLNQWNSQSQGGNHIPGNMLHEQHLHMDFHQRISRQDEAQCNNLSSDGNVIGQAVASRGTKPLDSSVSIKKAHRNQQRWLLFLLHARRCPAPEGRCQERYCYSAQKLCRHIDGCNLPHCSYPRCHHTRLLLIHFRNCKDPCCPVCVFVRNYRRSFQVKSQTRPDSDSGVPVAANGSCKSYNSVVPSPRLIQKPLPVIETSDDLQPSLKRMKIEQCTQSFSLENENSTVSVLANCESNVSKDAPCQDYIHGDMSMSIKSELTEVKAEGPVHSTPANPCEMKINDVEDRWPGGEPVTYDEPVTLSRPENIKTEKETGQDQPENLNQPSENFGGTKSGXPKIKGVSLIELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGTGDTRHYFCIPCYNEARGDSIFVDGTAIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPKTILSEQIQQRLSRRLEQERQERARLQGKSRDEVPGAEELVVRVVSSVDKKLEVKQRFLEIFREENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLNQEEDGRKLNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEVELKREERERHPINHREKHALYRIEISDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGVDHPHRLTNHPSVADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVASNAG 1725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1505 1725 SUPERFAMILY RING/U-box 1528 1595 - -
Prci12g1505 1725 Gene3D TAZ domain 1604 1721 IPR035898 -
Prci12g1505 1725 ProSiteProfiles Zinc finger TAZ-type profile. 1607 1690 IPR000197 -
Prci12g1505 1725 FunFam Histone acetyltransferase HAC1-like protein 1604 1721 - -
Prci12g1505 1725 SUPERFAMILY FYVE/PHD zinc finger 1053 1093 IPR011011 -
Prci12g1505 1725 ProSiteProfiles Zinc finger ZZ-type profile. 1427 1490 IPR000433 GO:0008270
Prci12g1505 1725 ProSiteProfiles Zinc finger ZZ-type profile. 1547 1600 IPR000433 GO:0008270
Prci12g1505 1725 Gene3D - 1546 1597 IPR043145 -
Prci12g1505 1725 SMART KAT11_2 1142 1439 IPR013178 GO:0004402|GO:0006355|GO:0016573
Prci12g1505 1725 FunFam Histone acetyltransferase of the CBP family 12 1423 1482 - -
Prci12g1505 1725 MobiDBLite consensus disorder prediction 232 295 - -
Prci12g1505 1725 MobiDBLite consensus disorder prediction 874 926 - -
Prci12g1505 1725 MobiDBLite consensus disorder prediction 908 922 - -
Prci12g1505 1725 Coils Coil 78 105 - -
Prci12g1505 1725 ProSitePatterns Zinc finger PHD-type signature. 1020 1091 IPR019786 -
Prci12g1505 1725 MobiDBLite consensus disorder prediction 1 48 - -
Prci12g1505 1725 FunFam Histone acetyltransferase HAC1 1546 1597 - -
Prci12g1505 1725 MobiDBLite consensus disorder prediction 527 559 - -
Prci12g1505 1725 Pfam Histone acetylation protein 1148 1365 IPR013178 GO:0004402|GO:0006355|GO:0016573
Prci12g1505 1725 SMART zz_5 1426 1470 IPR000433 GO:0008270
Prci12g1505 1725 SMART zz_5 1546 1592 IPR000433 GO:0008270
Prci12g1505 1725 ProSitePatterns Zinc finger ZZ-type signature. 1552 1579 IPR000433 GO:0008270
Prci12g1505 1725 Gene3D TAZ domain 658 760 IPR035898 -
Prci12g1505 1725 SMART TAZ_2 661 739 IPR000197 -
Prci12g1505 1725 SMART TAZ_2 1610 1688 IPR000197 -
Prci12g1505 1725 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1109 1545 IPR031162 GO:0004402
Prci12g1505 1725 SUPERFAMILY TAZ domain 664 743 IPR035898 -
Prci12g1505 1725 PANTHER CBP/P300-RELATED 84 417 IPR013178 GO:0004402|GO:0006355|GO:0016573
Prci12g1505 1725 Gene3D - 987 1047 IPR038547 -
Prci12g1505 1725 SMART PHD_3 993 1092 IPR001965 -
Prci12g1505 1725 MobiDBLite consensus disorder prediction 10 48 - -
Prci12g1505 1725 Pfam PHD-finger 1050 1092 IPR019787 -
Prci12g1505 1725 SUPERFAMILY TAZ domain 1609 1692 IPR035898 -
Prci12g1505 1725 Coils Coil 1125 1145 - -
Prci12g1505 1725 Gene3D - 1423 1485 IPR043145 -
Prci12g1505 1725 Pfam Zinc finger, ZZ type 1549 1590 IPR000433 GO:0008270
Prci12g1505 1725 Pfam TAZ zinc finger 668 736 IPR000197 -
Prci12g1505 1725 Pfam TAZ zinc finger 1617 1687 IPR000197 -
Prci12g1505 1725 MobiDBLite consensus disorder prediction 127 146 - -
Prci12g1505 1725 CDD PHD_HAC_like 1019 1091 - -
Prci12g1505 1725 ProSiteProfiles Zinc finger TAZ-type profile. 658 739 IPR000197 -
Prci12g1505 1725 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1048 1092 IPR013083 -
Prci12g1505 1725 SUPERFAMILY RING/U-box 1407 1486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1505 Prci-Chr12 32408679 32420759 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Prci12g1505 HAT_KAT11 1.3e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1505 K04498 - gmx:100809207 2684.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1505 12 32408679 32420759 Prci12g1505 12 32408679 32420759 ECH