Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1503 ATGAGTTTTGGGGGATTTCTCGACAATAACGGGTGGCGGTGCGGCGGTGGAGGAGGCGGAGGCGGCGATAGAATCGTCGCTGATATTCCTTACAGCAACGGCAGCACCAACGATAATAGAATGCCGTCGAGTGGTTCAATCTCGCAGCCTTGTGTCGTCACACAACCAGCTGCGATGGCGAAATCCATGTTCAGCTCTCCGGGACTGTCTCTCGCACTTCAAACGAATCTTGACGAGCAACAAGGAGATGCGAATAGAATGCCTGAAAGCTACGAGCCAAATGTTGGGGCGAGAAGAAGCAGAGAGGAAGAACACGAAAGCAGATCTGGCAGTGATAATATGGAAGGCCCCACTTCCGGCGACGATCAAGACGCCGCCGACAACCCTCCGAGGAAGAAACGCTATCACCGACATACCCCTCAACAAATACAAGAACTCGAAGCTCTGTTCAAGGAGTGTCCTCACCCAGATGAGAAACAAAGACTAGAACTGAGCAGAAGGCTTTCCTTGGAAACCAGACAGGTGAAATTTTGGTTCCAAAATCGAAGAACCCAGATGAAGACCCAATTGGAGCGCCATGAAAACACTTTGCTCAGGCAAGAAAACGATAAACTGAGAGCAGAAAACATGTCTATAAGAGAAGCTATGAGGAATCCTATATGTTCAAATTGTGGAGGCCCAGCCATTATCGGCGAGATTTCCCTCGAAGAACAACACCTGAGAATCGAAAACGCTCGACTGAAGGACGAGCTAGACCGAGTTTGTGCTCTAGCAGGAAAGTTTCTGGGCCGACCCATTTCTTCATTGACCAGTCCGATCGGTCCTCCATTGCCAAACTCAAGCTTAGAACTCGGAGTTGGGATGAACGGGTTTGGTGGTATGAGCACCGTGCCGTCGACATTGCCTTTAGGGCCAGATTTTGGGATTTCGAGCCAATTAGCCATAGTGCCTCCGGCGACAACATCGACGGCCACGACGATGACCAGAGCAGTGGGGAATTTGGTCAGCGGACTTGATAGGTCCATAGAGAGGTCTATGTTTCTGGAGCTTGCCTTGGCGGCCATGGACGAGCTGGTGAAGATGGTGCACACCGATGAGCCTCTCTGGTTAAGAAGCTCAGAAGAAGGAGGAAGAGAGATTCTGAACCATGAAGAGTACATGAGAACTTTCAGTTCTCCTTGCATTGGCATGAGACCAAATGGTTTCGTCTCCGAGGCTTCAAGAGAAACTGGAATGGTCATCATCAACAGCCTGGCCCTCGTCGAAACTCTAATGGACTCAAATCGATGGGCAGAAATGTTTCCATGTTTGATTGCCAGAACCTCCACAACCGAAGTAATATCCAGTGGAATAAATGGAACCAGAAACGGTGCACTTCAACTGATGCATGCTGAGCTTCAGGTTCTATCGCCATTGGTGCCAGTTCGAGAGGTGAATTTTCTTCGATTCTGCAAGCAACACGCGGAGGGGGTGTGGGCTGTAGTTGATGTGTCGATCGAGACAATTCGAGAACCTTCTGGAGCTGCTGTTTCGTTTATGAACTGCAGAAGACTTCCTTCTGGGTGTGTTGTTCAGGATATGCCAAATGGTTACTCCAAGGTGACTTGGGTGGAACACGCAGAATACGATGAAAGCCAAGTCCACCAACTCTATAGATCCTTGTTGAGCTCCGGCATGGGCTTTGGTGCTCAACGGTGGGTCGCCACCCTGCAACGTCAATGCGAGTGCCTTGCCATCTTAATGTCCTCCTCCGTTCCCTCTCGAGATCACACCGCTGCCATAACGGCCGGTGGCCGGAGGAGCATGTTGAAGCTAGCGCAGCGGATGACCAACAACTTTTGTGCCGGAGTTTGCGCTTCAACCGTGCACAAGTGGAACAAGCTGAACGCAGGAAACGTCGACGAGGACGTCCGGGTGATGACGCGGAAGAGCGTGGACGATCCCGGCGAGCCGCCAGGGATAGTTTTGAGCGCAGCCACCTCCGTTTGGCTTCCCGTTTCACCCCAGAGACTGTTCGATTTCCTACGTGATGAGCGTCTGCGAAGCGAATGGGACATTCTCTCAAACGGTGGGCCCATGCAAGAGATGGCCCACATCGCCAAAGGCCAAGACCACGGCAATTGCGTCTCTCTCCTAAGGGCCAGTGCGATGAATGCAAACCAGAGTAGCATGCTCATCCTGCAGGAGACATGCATAGACGCGGCGGGTTCGCTTGTGGTGTACGCTCCTGTGGACATCCCGGCCATGCATGTGGTGATGAACGGCGGTGACTCGGCTTATGTGGCGTTGTTACCTTCGGGGTTCGCTATAGTCCCGGATGGACCGGGGTCGCGTGGATCCCAAACTCCGGCTAGCAATGGGGACGCGAACGGTGGCGTTAATGAGAGAGTGAGTGGGTCCCTCCTGACGGTGGCGTTTCAAATCCTCGTGAATAGCCTCCCTACGGCCAAGCTCACGGTGGAATCGGTAGAGACGGTGAACAACCTCATCTCGTGTACTGTTCAGAAAATAAAGGCCGCTCTTCACTGTGAAAGCTGA 2538 0.5229 MSFGGFLDNNGWRCGGGGGGGGDRIVADIPYSNGSTNDNRMPSSGSISQPCVVTQPAAMAKSMFSSPGLSLALQTNLDEQQGDANRMPESYEPNVGARRSREEEHESRSGSDNMEGPTSGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLSLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIREAMRNPICSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLTSPIGPPLPNSSLELGVGMNGFGGMSTVPSTLPLGPDFGISSQLAIVPPATTSTATTMTRAVGNLVSGLDRSIERSMFLELALAAMDELVKMVHTDEPLWLRSSEEGGREILNHEEYMRTFSSPCIGMRPNGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPCLIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIETIREPSGAAVSFMNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRSLLSSGMGFGAQRWVATLQRQCECLAILMSSSVPSRDHTAAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQTPASNGDANGGVNERVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1503 845 ProSiteProfiles START domain profile. 340 579 IPR002913 GO:0008289
Prci12g1503 845 SUPERFAMILY Homeodomain-like 116 189 IPR009057 -
Prci12g1503 845 FunFam Homeobox-leucine zipper protein GLABRA 2 349 575 - -
Prci12g1503 845 ProSitePatterns 'Homeobox' domain signature. 164 187 IPR017970 GO:0000981|GO:0006355
Prci12g1503 845 Gene3D - 118 205 - -
Prci12g1503 845 Coils Coil 183 218 - -
Prci12g1503 845 SUPERFAMILY Bet v1-like 605 838 - -
Prci12g1503 845 CDD homeodomain 131 189 IPR001356 GO:0003677
Prci12g1503 845 SUPERFAMILY Bet v1-like 342 576 - -
Prci12g1503 845 MobiDBLite consensus disorder prediction 30 49 - -
Prci12g1503 845 SMART HOX_1 130 193 IPR001356 GO:0003677
Prci12g1503 845 ProSiteProfiles 'Homeobox' domain profile. 129 189 IPR001356 GO:0003677
Prci12g1503 845 MobiDBLite consensus disorder prediction 95 111 - -
Prci12g1503 845 FunFam Homeobox-leucine zipper protein HDG1 119 205 - -
Prci12g1503 845 Pfam Homeodomain 132 187 IPR001356 GO:0003677
Prci12g1503 845 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 128 842 IPR042160 -
Prci12g1503 845 SMART START_1 349 576 IPR002913 GO:0008289
Prci12g1503 845 MobiDBLite consensus disorder prediction 28 49 - -
Prci12g1503 845 Pfam START domain 349 576 IPR002913 GO:0008289
Prci12g1503 845 CDD START_ArGLABRA2_like 344 575 - -
Prci12g1503 845 MobiDBLite consensus disorder prediction 79 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1503 Prci-Chr12 32334711 32341481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1503 1 845 Homeobox Transcription Factor Family AT3G61150 65.962 0.0 1066
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci12g1503 START 5.9e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1503 K09338 - qsa:O6P43_027188 1355.5