Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1499 ATGGAGTTTGTAGCCACCATGTTTGGCAAAGTGTTGGATCTTGTGGTGGATCCTGTTAAGCGGCAACTGGGTTACCTTTGGAACTACAAGAGCAATCTTGAGGAGCTGAGGGGATGTGCTCAGAGGCTCAAAGATGAAAGGCAGAGTATGATTGCTCGAGTTCGAGAAGCTGAAAGAAATGGAGAAAACATTGAAGATCGTGTTAACAACTGGTTGACAGAGATGGATGAGAAGATTGCTGAAATAGACATGTTTTTGGGAGATGAAGACCACTTGAAGACAGGGTGCTCCAACAGTTCGTTTCCTAATCTGAGGTTAAGGCATAAGCTCGGCAGAAAAGCAAAGAAGATGAACCCAGCGTGTGCTGATCTGGTGCAACAGGCGAACTTCACGATAATTTCTTATCGCCCAGAGCCTATTGCAATAGATGCTGCTCTTTTTGATGGTGGTTATGAATTGTTTAGCTCTAGAGAAGCCATTATCGAGGAGGTTATGAATGCTCTGAGAGATTCCACAATTACAATGATCGGTATCCTTGGGCAAGGTGGTGTTGGCAAAACCACTTTAGCTAAAGCAGTTGCTAGGAAAGCCATGGCAGAAAAGCTATTCAATGTCGTGGTTACGGCAAATATAACAAGCACTCCTGATGTAAGACGGATTCAAGGAGAAATAGCAGACATGTTGGGCTTAAGATTGGATGACGAGAGTGAGATTGGAAGAGCTGGTCGTTTGCTACAAAGGTTGAAGAAGGAGAAAGAGAGCATTTTGGTTATCCTTGATGATCTTTGGGCAGGACTTGACCTTAACATGTTGGGGATTCCATCTAATGATGATGATGTCAGCCAGATGACTATCAAAGATATGCATGATTTTGGTCCTAATATGTTGAAAACAGAAAAGCGCCCTGGTGGCTTCAAAAGGTGCAAGATTTTGTTAACTTCTCGAATCAAAGGGGTATTGTTGAGCGAAATGGATGTGAAGGAAAACTCAATCTTCTCTGTTGAAGTCTTGGAAGAAAATGATGCAGAAAAATTGTTCAACAAGGTGGCAGGAATATCTGATGAAGATTCTGCAGAGTTGAAATCATTATCGACTAAAATTGCCAATAAGTGTGCAAAGTTGCCAGTGGCATTAGTAACAGCTGGAAAGGCTTTAAAGAATAATAAAAGCAAATATGTCTGGGAAAATGCACTACAAGAAATCGAAAGGCAAGAATTGGTTGGAGTGCTAGAGCCTGTGGAGATTTCTACAAAATTAAGTTATGATCATTTGAAAAGAGAAGATCTCAAGTCTATTTTTATACTTTGTGCTCAAATGGGTGAGGATCTGTTTATAATGGATTTGGTGAAATATTGCATTGGTTTGGGCATATTTCAAGGAGTTACGGTAAAAGAAGCTCGGGATAGAACAAATATGTTGATCAACAAGTTAAAAGACTCAAGTTTGTTGCTGAATACTAGTTCTTATGATTGCATCACCATGCATGATATGATTCGTGATGCTGCCCTATCAATAGCTTCTAAGGAGAAAGATGCTTTTACCCTAAGATATGGTAAACTAGATGAGTGGCCTGACAAGGATACATTTGAAAGGTACACCAGCATCTCTTTTCATCATTGTGATATCGTTGATGATATTCCAGAAGGTATAAATTGCCCTAGACTCAAAGTCTTCCATCTTAACAGCAAAGAACCTTGCTTGAAAATACCAGACAAACTTTTTGAAGGCATGGGTGAACTAAGAGTATTAATATTGTCTGGTATTGATCTATTAAACTTGCCTTCTTCAATTAAATGCCTCAAAAAGCTTAGAAAGCTTTGTTTGGAGCAATGTCTGTTGGGTGAAAACATATCCATCATTGGAGAGTTGGAGAATCTAAGAATTCTCAGCCTCTCTGGATCTCGATTTGAAATTTTTCCAAGTGAAGTGAGAAAGTTAGGAAAGCTACAATTGTTGGACATTAGTAACTGTTCCAAACTTCAAGTGATTCCATCTAATGTAATATCAATGTTGAATAATTTGGAGGAGTTATATATGGGAAACAACTTGATCCAATGGGATGTTGAAAGAAAAATAAACCACAATGGAATTGCTTCGCTTATTGAATTGAATCATCTTCAGCAATTGAGAAGTTTGGACATACACATTCCTGATATTGTAGCTTTGCCGAGGAGCTTGTCCTTTGACAAGTTAGATAGCTTCAAAATTGTGATTGGTGACTCAAAAATGCTTTTGTTAGAAGATTTCAAGATGCCTTTCAAGTATGAGTCAACAAAAGCTTTGGCTCTGCATCTAAGAAAGGGTGATGACATTCACTCCCAAACAGGTATTAAAATGTTGTTCAAAAGCATTGAACAATTATTTTTGGGGGAAGTAGATGGTCTTCAAAATATTATCTATGAGTTAAATGTGGAAGGACTTCCAAGTCTTAAACATTTAACAATTATAAAGAACCTTGACATCCAGTATATAATCTATTCAAGAGAGAGGAAACATCAGGCAATGGCTTTTCCCAAGTTGGAGTCAATGTGTTTGTATAATCTTGAGAGGATAGAGAAAATATGTAATTGTCAGCTCACAGATGCCTCTTTTCGCAACTTAAAAGCCGTTAAGATCAAAATCTGTGGCCGATTGAAAAATGTCTTCTCTTCTTACATGGTTAGATTTCTCACAAAGCTTGAAACAATTGAAGTTTCTGATTGTGATTCTTTAAAGTATGTTGTTGTTGTGGAAAGACAAGAGAACACTACTAACAACAACAATGCAAATGATGATAGCATTGCATTTCCTCAATTGCGCACTTTGATATTGCAATCTTTACCAGTATTGGCTTGTTTCTATGCTATTGACAAGAATGTTCCAGTCTCTCAAATAGAAGCTACTACTGCTTGTCATCCTCTATTTAATGCAAAGGTTTCATTTCCGAGCCTAGAGAGCTTGGAGTTGTCTTCAATCAATGTCAAGGAGGTATGGGGTGACCAACCCTTCCCAAGTGCCTCCTTTCAAAATCTGACAAAATTGATTGTCAAGGACTGTGGTAGTTTGAAATATTTAGTTTCATCATCCCTGGCCAAGAGTTTGATGAAATTACAAAGCCTTTTTATTAGAGGATGTGATATGATGATGGATATTTTTGATGCTGAAGACGTCAGTTCAGATGAAGCAGGCAAGGAGGTTGATGTCTTTCCTCAATTGAAGAAAATTGAAATCACCAGCATGAAGAATTTGAAATCCATTTGGCATGGCCATGCTAGCCTACATTCCTTTTGCTGTTTGGAATCTTTGATCATCAAAGATTGTGCAAAACTTGTCACCATTTTCCCTCAATACATGGTAGGAAAATTTCATAATCTTGGCAGCATGGAGGTTATCAATTGTGAGTTGGTGAATGAGGTATTTGACCTTCAATCTACATCTCAAATTAGTGGTAGGAATGAAACAAACTTGCGCAATCTTCACTTGGAAAACCTACCAAAATTGAAGCATGTATGGAGCAGAGATCCTCAAGGAATTCTTAACTTCAAAAATTTTCAAGATGTTTCTTTTATTAGTTGCCCTGGCCTAGAAAATCTTTTCCCATTTTCTGTTGCCATTAATCTTATGAAATTGGAGAGCATTGAAATACGTGATTGTGTGGGGATGAAGGAAATTGTAACCAGGGATGATACATCAAATATAGTCAAATTCATGTTTGAGTTTCCTAAGCTAACCTCGCTTACATTAGTTGAACTACCAAAACTTAGGAGCTTCTACCAGGGATCACATGGTGTAGATTTCCAAGCATTGACCGAATTGGGTCTGACTCGTTGTGACAAGTTGGAAGCATTTGGCAAGGAAACAGGAAATTCAGAACTGAAACCAATTCTCTCAGCTTTAGTTAAGGTGTTATCCAACTTGGAAAAACTAGCATTGGGCCCAAAGGAATGGAAGTGGTTGCAGGACTCTGTTGGTAGTAATATGTATCAAATGCACAATATAAAACATCTTCTTCTTGATAGACTGAGTAGTATTGAAATTCTCTTATGGTTTCTTCAGAGAGTTCCTAATTTAGAAGTCCTATATTTGTGGAATTCTGCTGTCAAACATGTGTCGCCTAATGGAAGCCTTGTTTCGCTTCAGAAAATTGGAACTGTTGGACAACTTAAAGAATTGAGATTATTAGAGTCATATCTTCCACAGAATATATGCTTAGAAAATGATGGCATGTTTCAAAGGGTTGAGCGGCTATACATTTATGATTGTCATCATTTGAAAAACTTATTGCCTTCCCCCGTATCATTCATTTACTTGACATATCTGAAAGTTTGGAATTGTGGCAAATTAAAGAATTTAATTTCTTCGTCCACTGCAAAATCCTTGGTGGAACTTACCGTACTGAAGGTTGCTGAATGTGAAATGATGGAGGAAATTATCACGGTGGAAGAGAATGCAGAAGACACAGGAGATGAGATTGTTTTTGGCAAATTGAAAATTTTAAAACTTGAGTCTCTAAGAGACCTCACAAGTTTCTGCAATTCCAAGGATAAACTGGTCTTTGGGTTTCCATCCCTTGAAAAATTGATAGTGAGCAACTGCTCTAAGTTGGAAAATTTCTGTGAGAAAATCCAAAGCACACCAAACTTGCGAAAGGTCAACATTGAAGAAGGAGACGAAGGAGAGAAAGGGTGCTGGGAAGGTGATCTGGATAGTACGATTCGAAAGATTTTTGTGGATAAGCTGGCACAATTTGCACGTGATGTGCAATATCTGAAGCTAGGAGACTACCCTAAGCTACAAGAGATATGGCATGGCGTAATGCCTGTCCCTGATGGAGGATTCAATAAGTTGAAGACTTTGATAGTGCATGGTTGCCATTTCTTATCAAACAATGTGATCCCTTCTCATTTGCTTGGCTTCCTTTATAACTTAGAATACTTAAAAGTACAAAATTGTGATTCTGTAAAGGCAATATTTGAGGTGGGATCCTTGCCTTCGCCCTTCCCCATTCCCTTGAAAACATTGATTTTGGAACAGCTCCCTGATCTGGAGAATGTTTGGAATGTGGACCCTCAAGAAATTCTCAGCTTCCAATCTTTGCAACTTGTGTTTGTTAATGGATGCGGAAGCCTCAAGAGCTTATTTCCCGCATCAATGTCCCAACACAAACTTGAAAGGCTTGAAATACTACGCATGCAATGCTGCGGGGGGTTGGTAGAAATTGTTGCAAATGATGAAATAATCCTAATAGGGGCAAATTCAAACTCAATTATGTTTCCAAGCTTAACTAGGTTGCATCTACAGAATTTGCCACAACTCAAGTGCATCTATCCAGTAGTAAATGACTTGGAATGGCCAAAGTTAAAGGTACTTGATGTATATCATTGTGATCAATTGAAGGTGTTGCCAACACGAGAACAAGATCATTTTCCAATTGATGTAGGAGCTATGGTCTCATTTGAAAAGAATTTTCCCAACATAGAGCAATTGTCACTCAACAAGGAAGACTTCATGAGAATTAATTCGCAAGGACAGTCTCACGCAAACTTCCTTTGTAAATTGAAATGCCTCATATTGCAATGCTTCCATGATTTTTTGGATGCATTTCCATGTGAACTCTTTCAAAAGGAATCACTTCCCAACTTAGAAATGCTTCAAGTGGCTTGTAGCGCCTTCAAAGAAATTTTCAGCTCTCAAAGACCTAATGTGGATCTTGGTACTAAAATGTTGTCTTCACATCTCAAAGGGTTGGAATTATTTTCTCTGAGGCATCTCGTATCCATAGGGCTAGAGAAGTCATGGGCAGCACCAACTCTTGAAAACCTAGAAACCTTGAGAGTGGAGATTTGTCCTTGCTTGAAGAACTTGGTATCGTCTGCTGTATCTTTTACAAAATTAAGGGAATTGCGTATATATGAATGTCAAGGATTGGTATATTTGCTCACGTTGTCAACTGCAAGGAGCTTAGTTTCACTTGAAGAGCTTTCCATTGGCAAATGTGGATCAATACAAGAAATAGTGCCCAAAGAAGATGCATCGGATGAAGATGAGATAACATTCGAGAAGCTCAAAAGATTGTCTCTTTACTCTCTCCAAAGACTTGGTAGCTTTCACCTGGGAATTCTACATTGA 6108 0.3836 MEFVATMFGKVLDLVVDPVKRQLGYLWNYKSNLEELRGCAQRLKDERQSMIARVREAERNGENIEDRVNNWLTEMDEKIAEIDMFLGDEDHLKTGCSNSSFPNLRLRHKLGRKAKKMNPACADLVQQANFTIISYRPEPIAIDAALFDGGYELFSSREAIIEEVMNALRDSTITMIGILGQGGVGKTTLAKAVARKAMAEKLFNVVVTANITSTPDVRRIQGEIADMLGLRLDDESEIGRAGRLLQRLKKEKESILVILDDLWAGLDLNMLGIPSNDDDVSQMTIKDMHDFGPNMLKTEKRPGGFKRCKILLTSRIKGVLLSEMDVKENSIFSVEVLEENDAEKLFNKVAGISDEDSAELKSLSTKIANKCAKLPVALVTAGKALKNNKSKYVWENALQEIERQELVGVLEPVEISTKLSYDHLKREDLKSIFILCAQMGEDLFIMDLVKYCIGLGIFQGVTVKEARDRTNMLINKLKDSSLLLNTSSYDCITMHDMIRDAALSIASKEKDAFTLRYGKLDEWPDKDTFERYTSISFHHCDIVDDIPEGINCPRLKVFHLNSKEPCLKIPDKLFEGMGELRVLILSGIDLLNLPSSIKCLKKLRKLCLEQCLLGENISIIGELENLRILSLSGSRFEIFPSEVRKLGKLQLLDISNCSKLQVIPSNVISMLNNLEELYMGNNLIQWDVERKINHNGIASLIELNHLQQLRSLDIHIPDIVALPRSLSFDKLDSFKIVIGDSKMLLLEDFKMPFKYESTKALALHLRKGDDIHSQTGIKMLFKSIEQLFLGEVDGLQNIIYELNVEGLPSLKHLTIIKNLDIQYIIYSRERKHQAMAFPKLESMCLYNLERIEKICNCQLTDASFRNLKAVKIKICGRLKNVFSSYMVRFLTKLETIEVSDCDSLKYVVVVERQENTTNNNNANDDSIAFPQLRTLILQSLPVLACFYAIDKNVPVSQIEATTACHPLFNAKVSFPSLESLELSSINVKEVWGDQPFPSASFQNLTKLIVKDCGSLKYLVSSSLAKSLMKLQSLFIRGCDMMMDIFDAEDVSSDEAGKEVDVFPQLKKIEITSMKNLKSIWHGHASLHSFCCLESLIIKDCAKLVTIFPQYMVGKFHNLGSMEVINCELVNEVFDLQSTSQISGRNETNLRNLHLENLPKLKHVWSRDPQGILNFKNFQDVSFISCPGLENLFPFSVAINLMKLESIEIRDCVGMKEIVTRDDTSNIVKFMFEFPKLTSLTLVELPKLRSFYQGSHGVDFQALTELGLTRCDKLEAFGKETGNSELKPILSALVKVLSNLEKLALGPKEWKWLQDSVGSNMYQMHNIKHLLLDRLSSIEILLWFLQRVPNLEVLYLWNSAVKHVSPNGSLVSLQKIGTVGQLKELRLLESYLPQNICLENDGMFQRVERLYIYDCHHLKNLLPSPVSFIYLTYLKVWNCGKLKNLISSSTAKSLVELTVLKVAECEMMEEIITVEENAEDTGDEIVFGKLKILKLESLRDLTSFCNSKDKLVFGFPSLEKLIVSNCSKLENFCEKIQSTPNLRKVNIEEGDEGEKGCWEGDLDSTIRKIFVDKLAQFARDVQYLKLGDYPKLQEIWHGVMPVPDGGFNKLKTLIVHGCHFLSNNVIPSHLLGFLYNLEYLKVQNCDSVKAIFEVGSLPSPFPIPLKTLILEQLPDLENVWNVDPQEILSFQSLQLVFVNGCGSLKSLFPASMSQHKLERLEILRMQCCGGLVEIVANDEIILIGANSNSIMFPSLTRLHLQNLPQLKCIYPVVNDLEWPKLKVLDVYHCDQLKVLPTREQDHFPIDVGAMVSFEKNFPNIEQLSLNKEDFMRINSQGQSHANFLCKLKCLILQCFHDFLDAFPCELFQKESLPNLEMLQVACSAFKEIFSSQRPNVDLGTKMLSSHLKGLELFSLRHLVSIGLEKSWAAPTLENLETLRVEICPCLKNLVSSAVSFTKLRELRIYECQGLVYLLTLSTARSLVSLEELSIGKCGSIQEIVPKEDASDEDEITFEKLKRLSLYSLQRLGSFHLGILH 2035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1499 2035 SUPERFAMILY RNI-like 965 1249 - -
Prci12g1499 2035 Coils Coil 26 74 - -
Prci12g1499 2035 PRINTS Disease resistance protein signature 371 385 - -
Prci12g1499 2035 PRINTS Disease resistance protein signature 644 660 - -
Prci12g1499 2035 PRINTS Disease resistance protein signature 175 190 - -
Prci12g1499 2035 PRINTS Disease resistance protein signature 249 263 - -
Prci12g1499 2035 Gene3D - 336 425 IPR042197 -
Prci12g1499 2035 SUPERFAMILY L domain-like 1512 1969 - -
Prci12g1499 2035 Gene3D Ribonuclease Inhibitor 692 921 IPR032675 -
Prci12g1499 2035 SUPERFAMILY L domain-like 493 941 - -
Prci12g1499 2035 Gene3D Ribonuclease Inhibitor 1109 1295 IPR032675 -
Prci12g1499 2035 Gene3D Ribonuclease Inhibitor 1560 1736 IPR032675 -
Prci12g1499 2035 Gene3D Ribonuclease Inhibitor 922 1108 IPR032675 -
Prci12g1499 2035 Gene3D Ribonuclease Inhibitor 1808 2035 IPR032675 -
Prci12g1499 2035 Gene3D Ribonuclease Inhibitor 1312 1550 IPR032675 -
Prci12g1499 2035 Pfam NB-ARC domain 306 409 IPR002182 GO:0043531
Prci12g1499 2035 Pfam NB-ARC domain 158 278 IPR002182 GO:0043531
Prci12g1499 2035 Gene3D Ribonuclease Inhibitor 485 691 IPR032675 -
Prci12g1499 2035 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1634 1794 - -
Prci12g1499 2035 Gene3D - 149 330 IPR027417 -
Prci12g1499 2035 SUPERFAMILY L domain-like 1294 1547 - -
Prci12g1499 2035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 436 IPR027417 -
Prci12g1499 2035 SMART AAA_5 172 342 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1499 Prci-Chr12 32133192 32150125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1499 173 664 WRKY Transcription Factor Family AT5G45050 24.324 3.35e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1499 - - pcin:129288216 3990.65