Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1475 ATGGTGGAACAACGTGGAGAACAAGTTGACGATATTGATAGCTACTCCACAGAAGACTGGTTCTTGCAAGCACAAGAACTCGTGCCCATTGCTGTTAACAAAGCAAAAGAGGTTAAGGGCTTTCCTGGTAGATGGAAAGTGATTGTTTCAAAGATAGAACAGATCCCATCATGCTTATCAGACTTGTCTAGCCATCCTTGCTTCTCCAAGAATGCTCTTTGTAAGGAGCAATTGCAGGCAGTGTCAGAGACCCTTGAGCAAGCCATTGATTTAACTGAGCTATGCAGGAAGGAGAGGTATGAAGGTAAGCTTCGAATGCAAAGTGATCTCGATGCTTTATCCGGTAAATTGGATTTGAATTTACGAGATTGTAAGCTGTTGATCAAGACTGGTGTCCTTGGTGAGTCTACTTTTCCATTGAATGTGTCTGATACTGTGAAACAAGGCAACGATGTGAGGGAATTGTTTGCGCGGCTTCAGATTGGTGACTTAGAGGCAAAGCACAGAGCTATAGACAGTCTTGTTGAAGCAATGAAGGAAGAAGAAAAGAGTGTTATGTCTGTTCTAGGAAGAAGCCAAATTGCTTCTTTAGTTCAAATGTTAATGGCTACATCTCCTAGGATAAGGGAAAAAGCGGTTACTGTAATATGCTCTCTTGCAGAATCAGGGAACTGTGAGAATTGGCTTCTCTATGAAGGAGTTTTGCCGCCTCTTATCCGGCTTGTTGAATCTGGTGGGTCTCTTGGGAAAGAGAAGGCTGCAATATGTCTTCAGAGGCTGTCCATGTCGGAAGAATCAACCCGAGAAATCGTAGGACATGGCGGGGTTAGACCACTGATTGAGCTATGCGAAAATGGTGATGCTGTGTCCCAATCTGCTGCTGCCTGTTCTTTGAAGAACATATCAGCTGTTCCTGAAGTGAGACAAGCTTTAGCCCAAGAAGGCATTGTGAAGACCATGATCAATCTCCTTGATCATGGAATTTTACTAGGTTCAAAAGAGTATGCTTCAGAGTGCTTACAGAATCTCACATCAAGCAATGTCAATCTAAGAAGGTCTGTTATATCAGAAGGTGGTGCTAAGAGCCTTCTTGCTTATCTTGATGGTCCTCTCCCACAAGAGTCAGCTGTAACAGCATTGAGGAATCTAGTTGGATCAATCGGCGAGCGAGATTTAATCTCATTAGGCCTCCTTCCACGTTTGATCCATGTGATAAACTCCGGATCTTCTGGAGCTCAGCAGGCTGCTGTGACGGCAATATGCCGCGTTTTGATCTCATCAGAAATGAAGAAAATGGTGGCTGAAGCTGGATTCATCCCACTGCTCATAAAAATGCTGGAAGCTAAATCAAACAGCGCGAGAGAAGTGGCAGCGCAGGCGATCGCGAGCTTGATGACAGTAACACAAAACCGTAGGGAGGTGAGAAGGAATGATAAAAGTGTGCCAAATCTGGTTCAGTTGCTTGATCCAAGCCCGCACAATGCTGCAAAGAAATATGCAATTTCATGCCTATGTTCACTTTCTTCGAGCAGGAAATGTAAGAAGCTGATGATTGCTTATGGAGCAATTGGATATCTGAAGAAGCTTAAAGAGATGGATATTCCAGGAGCTAAAATGCTACTTGACAGATTGGAAAGAGGGAAATTGAGAAGCTTATTTATTAGAAAATGA 1671 0.4345 MVEQRGEQVDDIDSYSTEDWFLQAQELVPIAVNKAKEVKGFPGRWKVIVSKIEQIPSCLSDLSSHPCFSKNALCKEQLQAVSETLEQAIDLTELCRKERYEGKLRMQSDLDALSGKLDLNLRDCKLLIKTGVLGESTFPLNVSDTVKQGNDVRELFARLQIGDLEAKHRAIDSLVEAMKEEEKSVMSVLGRSQIASLVQMLMATSPRIREKAVTVICSLAESGNCENWLLYEGVLPPLIRLVESGGSLGKEKAAICLQRLSMSEESTREIVGHGGVRPLIELCENGDAVSQSAAACSLKNISAVPEVRQALAQEGIVKTMINLLDHGILLGSKEYASECLQNLTSSNVNLRRSVISEGGAKSLLAYLDGPLPQESAVTALRNLVGSIGERDLISLGLLPRLIHVINSGSSGAQQAAVTAICRVLISSEMKKMVAEAGFIPLLIKMLEAKSNSAREVAAQAIASLMTVTQNRREVRRNDKSVPNLVQLLDPSPHNAAKKYAISCLCSLSSSRKCKKLMIAYGAIGYLKKLKEMDIPGAKMLLDRLERGKLRSLFIRK 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1475 556 Gene3D - 149 540 IPR011989 -
Prci12g1475 556 SMART arm_5 347 385 IPR000225 GO:0005515
Prci12g1475 556 SMART arm_5 468 509 IPR000225 GO:0005515
Prci12g1475 556 SMART arm_5 263 303 IPR000225 GO:0005515
Prci12g1475 556 SMART arm_5 180 221 IPR000225 GO:0005515
Prci12g1475 556 SMART arm_5 304 345 IPR000225 GO:0005515
Prci12g1475 556 SMART arm_5 426 466 IPR000225 GO:0005515
Prci12g1475 556 Pfam Armadillo/beta-catenin-like repeat 264 303 IPR000225 GO:0005515
Prci12g1475 556 Pfam Armadillo/beta-catenin-like repeat 426 464 IPR000225 GO:0005515
Prci12g1475 556 SUPERFAMILY ARM repeat 193 529 IPR016024 -
Prci12g1475 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 553 - -
Prci12g1475 556 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 233 275 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1475 Prci-Chr12 31438574 31441877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1475 401 540 U-box Gene Family AT2G23140 34.752 2.07e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1475 - - zju:107433391 820.461