Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1470 ATGAAAATTACGTCACAGGAAGTTCTACTTCTTGGTATTTGGGGTGTTGGTGGGATAGGCAAAACAACCCTGGCTCGAGCTACATTTGACAAATTCTCTTCTCAATTTGAAAGCTATTGCTTCATAGAAAATGTGAGAGAGGAATCAACGAAGAGCAATGGTTTGAGTCATTTGCGTCAAAAGCTTCTTTCTAAGCTATTAGACCAAGATGCAGGTCTCCCCATAGATATGAATTATGCAAGGAGAAGGCTATCACGAAAAAGAGTCTTGATTGTGCTTGATGATGTATCCAATTCAAAGCAATTAAAAGATCTAGCTGGACAACAACTTTGCTTGGGGCGTGGCAGCAGAGTAATTGTAACAAGTAGAGACAAGCATGTTTTTAGGATTGGAGGGATTCATGATGAATATATACATGAAGTCAAGGAGTTGAATTTTGAAGAATCACTAAAACTTTTTAGTTTACATGCCTTCAAGCGAACTCACCCCAATGTGGGATATGAAAGGCTATCAGAAATGACAGTTGCCTATGCTAAAGGCATTCCTCTAGCTTTAGAAGTTTTGGGTTCCCATTTTCATTCTAGAGATAAGGCATACTGGGAGAGTGAGCTTGAGAAACTTAGAAAGTGTCCCCATCCAGAAATTCAAAATATATTGAAAGTTAGTTATGATGGATTAGATGACATGGATAAGGAAATATTTTTAGACATTGCATTTTTTTTCATTGGAGAAGAAAAAGATAGAGTTATTCATGTGCTAGAAGCTTGTGGTTTTAAAGCAGTTAGTGGAATACAAAATCTCATGGATAAATCTCTCATAAAACCAGGTTGGCTGAATGGTAAAAGTACTGAAATGCATGATTTGATACGAGAAATGGCTGAGCAAATAGTTCGTGCGGAATGTATTAAAGATCCTGCATTACGTAGCCGATTAAAAGATACAGATGAAATTTATGATGTATTAGAAAGTAACATGGGAACTAATAAAATTGAAGGCATCATATTGGATTTGGATCAAATCAAACATTTACAATTGGACCCAGACACCTTTGCAAAGATGAAAAATTTAAGATTTCTCAAAATTTTTCACCCTAAACCACGGATGATTGAGCACAAGACATATCATCATATAGAGCTTCCTTTTGGTCTGGGCTCTTTTCCAAAGAAATTAAGACAGCAATATTAA 1185 0.3612 MKITSQEVLLLGIWGVGGIGKTTLARATFDKFSSQFESYCFIENVREESTKSNGLSHLRQKLLSKLLDQDAGLPIDMNYARRRLSRKRVLIVLDDVSNSKQLKDLAGQQLCLGRGSRVIVTSRDKHVFRIGGIHDEYIHEVKELNFEESLKLFSLHAFKRTHPNVGYERLSEMTVAYAKGIPLALEVLGSHFHSRDKAYWESELEKLRKCPHPEIQNILKVSYDGLDDMDKEIFLDIAFFFIGEEKDRVIHVLEACGFKAVSGIQNLMDKSLIKPGWLNGKSTEMHDLIREMAEQIVRAECIKDPALRSRLKDTDEIYDVLESNMGTNKIEGIILDLDQIKHLQLDPDTFAKMKNLRFLKIFHPKPRMIEHKTYHHIELPFGLGSFPKKLRQQY 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1470 394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 391 IPR044974 GO:0006952
Prci12g1470 394 PRINTS Disease resistance protein signature 83 97 - -
Prci12g1470 394 PRINTS Disease resistance protein signature 10 25 - -
Prci12g1470 394 PRINTS Disease resistance protein signature 178 192 - -
Prci12g1470 394 Pfam NB-ARC domain 6 218 IPR002182 GO:0043531
Prci12g1470 394 SUPERFAMILY "Winged helix" DNA-binding domain 214 301 IPR036390 -
Prci12g1470 394 Gene3D - 1 132 IPR027417 -
Prci12g1470 394 Gene3D - 143 227 IPR042197 -
Prci12g1470 394 FunFam Disease resistance protein (TIR-NBS-LRR class) 145 227 - -
Prci12g1470 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 237 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1470 Prci-Chr12 31323744 31328622 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1470 7 391 WRKY Transcription Factor Family AT5G45050 34.644 6.76e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1470 - - pcin:129288098 785.408