Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1465 ATGGCTGCGTTTGCTTCTGCTCCTACTTCTCCTTCCCAAGAGAAATATGTTGTTTTTGTCAGCTTTAGAGGTCCAGATGTCAGATTTGGTTTTCTCAGCCATTTGGAAAAGGAGCTGCATCGGAAGGGGGTAGACGTCTATGTGGATGAGGATGACAGGCTGGAGAAAGGGCATGAAATATTGCCTGCACTTGAGAAAGCCATAGAAGAATCAATGATTGCGTTGGTCATATTCTCAAAAGATTATGCTTCTTCAAAGTGGAGCTTGCAAGAGCTTGTCAAAATCATGAAACGCAAGGAAGCGAGTCAACAGATTGTGATTCCAATTTTTTACGATGTAGATCCAACAGATGTCAGGCATCAAAAAGGCACTTATGCAAAATCATTTTATGATCATGACCATCAGTTCAAGGAAAACACGGATAACTTGCAAATTTGGAGGGGTGTCTTGCAGCAAACTGCAAACTTATCTGGTTTTCATTCATCAAATAATTATCAAAGAGAATCACAGCTCATTGATGCAATAGTCCAAGATGTCCTAAAAAAATTGGAAGATAACAACCTAGTTGCGCCACAATCCCAGCTTGTTGGATTTCATTACGATCTCGACATTGTTGAATCATTAATGAAAATTACATCACAAGAAGTTCGAGTTCTTGGCATTTGGGGTGTTGGTGGGATAGGCAAAACAACCCTGGCTCGAGCTATATTTGACAAATTCTATTCTCAATTTGAAAGTTGTTGCTTCATAGAAAATGTGAGAGAGGAATCAACAAAGAGCAATGGTTTGAGTGATTTGCGTCAAAAGCTTCTTTCTAAGCTATTAGACCAAGATGCAGGTCTCCCCATAGATATGAATTATGCAAGGAGAAGGCTGTCACGAAAAAGAGTCTTGATTGTGCTTGATGATGTATCCAATTCAAAGCAATTAAAAGATCTAGCTGGACAACAACTTTGCTTGGGGCGTGGCAGCAGAGTAATTGTAACAAGTAGAGACAAGCATGTTTTTAGGAGTGGAGGGATTCATGATGAATATATACATGAAGTTGAGGAGTTGGGTTTTGAAGAATCACTAAAACTTTTTTGTGTACATGCCTTCAATCAAACTCACCCCAATATGGGATATGAAAGGCTATCACAAATGACAGTTGCCTATGCTAAAGGCATTCCTCTAGCTTTAGAAGTTTGGGTTCCCATTTTCGTTCTAGAGATAAGGCATACTGGGAAAGTGAGCTTGAGAAACTCAGAAAGTGTCCCTATCCAGAAATTCAAAATATATTGA 1281 0.3934 MAAFASAPTSPSQEKYVVFVSFRGPDVRFGFLSHLEKELHRKGVDVYVDEDDRLEKGHEILPALEKAIEESMIALVIFSKDYASSKWSLQELVKIMKRKEASQQIVIPIFYDVDPTDVRHQKGTYAKSFYDHDHQFKENTDNLQIWRGVLQQTANLSGFHSSNNYQRESQLIDAIVQDVLKKLEDNNLVAPQSQLVGFHYDLDIVESLMKITSQEVRVLGIWGVGGIGKTTLARAIFDKFYSQFESCCFIENVREESTKSNGLSDLRQKLLSKLLDQDAGLPIDMNYARRRLSRKRVLIVLDDVSNSKQLKDLAGQQLCLGRGSRVIVTSRDKHVFRSGGIHDEYIHEVEELGFEESLKLFCVHAFNQTHPNMGYERLSQMTVAYAKGIPLALEVWVPIFVLEIRHTGKVSLRNSESVPIQKFKIY 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1465 426 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Prci12g1465 426 SMART till_3 15 156 IPR000157 GO:0007165
Prci12g1465 426 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 396 IPR044974 GO:0006952
Prci12g1465 426 Pfam NB-ARC domain 204 395 IPR002182 GO:0043531
Prci12g1465 426 Gene3D - 9 182 IPR035897 -
Prci12g1465 426 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 185 - -
Prci12g1465 426 Pfam TIR domain 15 186 IPR000157 GO:0007165
Prci12g1465 426 PRINTS Disease resistance protein signature 291 305 - -
Prci12g1465 426 PRINTS Disease resistance protein signature 218 233 - -
Prci12g1465 426 PRINTS Disease resistance protein signature 386 400 - -
Prci12g1465 426 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Prci12g1465 426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 396 IPR027417 -
Prci12g1465 426 Gene3D - 183 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1465 Prci-Chr12 31253098 31254927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1465 8 394 WRKY Transcription Factor Family AT4G12020 29.592 1.51e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1465 - - pcin:129287860 597.43