Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1460 ATGGCTGTGTTTGCTTCTGCTTCTTCTTCCCGAGTGAAATATGATGTTTTCATTAGCTTTCGGGGTTCAGACACCAGATTTGGTTTTCTCAGCCATTTGACAACGGCATTGCGTGGAAAGCAGATAGATGTCTATGTGGATGACAGGCTTGAGAGAGGGGATGGAATATCATTGGCACTTAAGGAAGCCATAGAAGGATCAATGATTGCGTTGGTCATATTCTCCAAAGATTATGCTTCTTCAAAGTGGTGCTTGCAAGAGCTTGTCAAAATCATGGAATGCAAGGAAGCAAGCGGACAAATTGTGTTACCAGTTTTCTATTGTGTAGATCCTTCAGATGTCAGGCGTCAAAAACGAACTTATGCAGATGCATTTGCACATCTTGAACTGAAGTTCAAGGATAACTCAAACGAGTTGAAAAATTGGAGATCTGTCTTGAAGAAAACCGCAGACTTATCTGGTTATCATTCATCAAATTTTCAAAACGAATCACAGCTCATTGATGCAATAGTCCAAGATGTCCTAAAAAAATTGAAAGATAACAACCTAGTTGTGCCAAAATCCCAGCTTGTTGGATTTGATCACAATCTCGACATTGTTGAATCATTAATGAAAATTACGTCACAAGAAGTTCGAGTTCTTGGTATTTGGGGTGTTGGTGGCATAGGCAAAACCACCTTGGCTAGAGCTACATTTGACAAATTCTCTTCTCAATTTGAAAGCTGTTGCTTCTTAAAAAATGTGAGACAGGAATCAAAAGGGATCAATGGTTTGGGTCGCTTGCGTCAAAAGCTTCTTTCTAAGCTATTACACCTAGACAAAGATGTCACCATAGATGAGGATGGTGCAAGGAGAAGGCTGTCACGGAAAAAGGTCTTGATTGTGCTTGATGATGTGTCCGATTCAAAGCAATTAAAAGATCTAGCTGGACAGCAACTTTACTTGGGACTTGGCAGTAGAGTAATTGTAACAAGTAGAGACAAGCATGTTTTTAGGAGTGGAGAGATTCATGATGAATATATACATGAAGTCAAGGAGTTGAATTTTGAAGAATCACTAAAACTTTTTAGTTTACATGCCTTCAAACAAACTCACCCCAGTATGGGATATGAAAAGCTATCAGAAATGACAGTTGCCTATGCTAAAGGCATTCCTCTAGCTTTAGAAGTTTTGGGTTCCCATTTTCATTCTAGAGATAAGGCATACTGGGAGAGTGAGCTCAAGAAACTCAGAAAGTATCCCCGTCCAAAAATTCAAAATATATTGAAAGTTAGTTATGATGAATTAGATGACATGGATAAGGAAATATTTTTAGACATTGCCTTTTTCTTCATTGGAGAAGGCAAAAATCACGTTACTCAAGTGCTAGAGGCTTGTGGTTTCAGAGCAATTAGTGGAATTGAGAATCTCATGGATAAAGCTCTCATAAAAACAAATCATGATTGTAAAATTGTAATGCATGATTTGGTTCAAGAAATGGGTGAGCAAATAGTTCGTGAGGAATGTTCAAAATATCCTGAATTACGTAGCCGATTAAATGATGCAGATGAAATTTGTGATGTACTGCAAAGGAACATGGGAACTGATAAAATTGAAGGCATCATATTGGATTGGAATAGAATAAATCATTTACGATTGAGCCCCGATACCTTCACAAAGATGACAAATTTAAGAATTCTCAAAATTTGTCATCCTTGGTATTCGTTCGAGGAGAAAAAAAATTCAAAGCTTTTTTATTATCTTGGCTCTTTTCCTAATAAATTAAGGTATTTTCATTGGGATCTATATCCATTGGAGTTTTTGCCATTAGAAGGCTATTGTTTCAAGAACCTTGTTGTGCTACGCATGCAACACAGCAATATTAAAAAGCTTTGGGATGGAGTGCAGGATCTTGTGAATTTAAAGATGTTAGATTTGAGGAGGTCTAGACAATTGATGGAGCTGCCTAATTTCTCTAGGGCACATAATCTTGAAGGAGTATATCTCTCGGGATGTGAAAGTTTATGTAGTGTTCATCCATCTATTTTTTGTCTTCAATCTCTTGTTACATTGGATGTATCTCATTGCGAGAAATCAGAGAGTCTTTATCATGGCTCTTTTCCTAATAAATTAAGGCATTTTTCTTGGGAGCAATATCCACTGGAGTCTTTGCCGTTGGGGCTTTGTATTAAGAACCTTGTCGAACTTTGTATAATGGACAGCAATATTAAAAAGCTTTGGGATGGAGTGCAGGATCTTATGAATCTAAAGGCATTAAGTTTGTCTGGGTGTAAACAATTGGTGGAGCTGCCTAATTTCTCTATGGCACGTAATCTTGAAGAGGTCAATCTCGGGGGTTGTGAAAGTCTACATAGTGTTCATCCATCTATTTTATCTCTCCAATCTCTTGTTGGATTGAATGTCTCTGATTGCAGGGAATTAGAGAGCCTTGAAAGTGAGACTCATTTAGAATCTCTCTCTTACCTTGGTGTTAAGGATTGTCAAAGCCTCAAGAAATTCTCTTTGTCATCAAAGAAATTGGACGAATTGTGTTTCTATGGCACTGGAGTTGAAATATTGCATTTATTGCCAATGGAAGGTTTCACGGAACTCAGATTGCTTAATATTTGTGGTGAAAGATTAGGGAGCCTTCCGATAAGTGAGCTATGTTGCTTGACAAATCTTGAGAGATTTGACATTTGGGATTTCCAACAGGTGATTCACACAACAGAGCTACGCTCTCTTTTTGATGCTTGGCGTAATTTACACCGCCTATGTTTGGAAAGATGCAGTTACTTGCTGGAAATCCCTGACAATATCAAGGCCTTAACAAGCTTGAAAATCATGATCTTGAAAGACTGCGAGAGGCTTAAGTCTATACTTGGACTTCCTCCCTTCCTTAATTATTTTAATGCTGAAGGATGCACTTCATTGGAGATCATATTCTCTGACTCTCTAGTTCAAAATCAGTGTCGATTTGATTTCCAGAATTGTATAAATTTGGATGAGTGTTCTCTTCGCTTCATTGAGAAACTAACTCATTTCTCTTTGACTTCAGCCTGTGAGGCTGAGATGTTCCGTGACTCTTCGGCTTGTTACCCGGGAAGCAGAGTTCCAGAATGGATGGAATATAAAAATCAGACAGAGGCTTCCAATGCTATCGAATTCATTTGCAATCTCAAACGATCACCCACCATCTTGTGTTGCTGCGTTGTTCCTCCTCATCCCCGCTTACTTACGTGGGGCGGGCCTACTGTGATGTCTCTCATGATGATAACAACAAATTCCGCAGTTCATTTGTTCATTATTCTAAACGTAAAATGA 3303 0.3836 MAVFASASSSRVKYDVFISFRGSDTRFGFLSHLTTALRGKQIDVYVDDRLERGDGISLALKEAIEGSMIALVIFSKDYASSKWCLQELVKIMECKEASGQIVLPVFYCVDPSDVRRQKRTYADAFAHLELKFKDNSNELKNWRSVLKKTADLSGYHSSNFQNESQLIDAIVQDVLKKLKDNNLVVPKSQLVGFDHNLDIVESLMKITSQEVRVLGIWGVGGIGKTTLARATFDKFSSQFESCCFLKNVRQESKGINGLGRLRQKLLSKLLHLDKDVTIDEDGARRRLSRKKVLIVLDDVSDSKQLKDLAGQQLYLGLGSRVIVTSRDKHVFRSGEIHDEYIHEVKELNFEESLKLFSLHAFKQTHPSMGYEKLSEMTVAYAKGIPLALEVLGSHFHSRDKAYWESELKKLRKYPRPKIQNILKVSYDELDDMDKEIFLDIAFFFIGEGKNHVTQVLEACGFRAISGIENLMDKALIKTNHDCKIVMHDLVQEMGEQIVREECSKYPELRSRLNDADEICDVLQRNMGTDKIEGIILDWNRINHLRLSPDTFTKMTNLRILKICHPWYSFEEKKNSKLFYYLGSFPNKLRYFHWDLYPLEFLPLEGYCFKNLVVLRMQHSNIKKLWDGVQDLVNLKMLDLRRSRQLMELPNFSRAHNLEGVYLSGCESLCSVHPSIFCLQSLVTLDVSHCEKSESLYHGSFPNKLRHFSWEQYPLESLPLGLCIKNLVELCIMDSNIKKLWDGVQDLMNLKALSLSGCKQLVELPNFSMARNLEEVNLGGCESLHSVHPSILSLQSLVGLNVSDCRELESLESETHLESLSYLGVKDCQSLKKFSLSSKKLDELCFYGTGVEILHLLPMEGFTELRLLNICGERLGSLPISELCCLTNLERFDIWDFQQVIHTTELRSLFDAWRNLHRLCLERCSYLLEIPDNIKALTSLKIMILKDCERLKSILGLPPFLNYFNAEGCTSLEIIFSDSLVQNQCRFDFQNCINLDECSLRFIEKLTHFSLTSACEAEMFRDSSACYPGSRVPEWMEYKNQTEASNAIEFICNLKRSPTILCCCVVPPHPRLLTWGGPTVMSLMMITTNSAVHLFIILNVK 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1460 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 440 IPR027417 -
Prci12g1460 1100 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Prci12g1460 1100 Gene3D - 176 341 IPR027417 -
Prci12g1460 1100 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 155 IPR035897 -
Prci12g1460 1100 SUPERFAMILY L domain-like 486 690 - -
Prci12g1460 1100 PRINTS Disease resistance protein signature 744 760 - -
Prci12g1460 1100 PRINTS Disease resistance protein signature 213 228 - -
Prci12g1460 1100 PRINTS Disease resistance protein signature 286 300 - -
Prci12g1460 1100 PRINTS Disease resistance protein signature 381 395 - -
Prci12g1460 1100 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 180 - -
Prci12g1460 1100 SMART till_3 13 152 IPR000157 GO:0007165
Prci12g1460 1100 Gene3D Ribonuclease Inhibitor 699 850 IPR032675 -
Prci12g1460 1100 Gene3D Ribonuclease Inhibitor 524 698 IPR032675 -
Prci12g1460 1100 Gene3D Ribonuclease Inhibitor 851 1021 IPR032675 -
Prci12g1460 1100 Pfam TIR domain 13 181 IPR000157 GO:0007165
Prci12g1460 1100 Gene3D - 10 175 IPR035897 -
Prci12g1460 1100 Gene3D - 346 430 IPR042197 -
Prci12g1460 1100 SUPERFAMILY L domain-like 697 1008 - -
Prci12g1460 1100 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 699 835 IPR044974 GO:0006952
Prci12g1460 1100 FunFam Disease resistance protein (TIR-NBS-LRR class) 348 430 - -
Prci12g1460 1100 Pfam NB-ARC domain 199 430 IPR002182 GO:0043531
Prci12g1460 1100 Pfam Leucine Rich Repeat 610 629 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1460 Prci-Chr12 31179770 31183758 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1460 650 978 WRKY Transcription Factor Family AT4G12020 29.942 1.10e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1460 - - pcin:129298605 1764.59