Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1459 ATGATTGCGTTGGTCATATTCTCCAAAGATTATGCTTCTTCAGAGTGGTGCTTGCAAGAACTTGTCAAAATCATGGAATGTAAGGAAGCAAGTGGACAAATTGTGTTACCAGTTTTCTATTGTGTAGATCCTTCAGATGTCAGGCGTCAAAAACGAACTTATGCAGATGCATTTGCACATCTTGAACTGAAGTTCAAGGATAACTCAAACGAGTTGAAAAATTGGAGATCTGCCTTGAAGAAAACCGCAGACTTATCTGGTTATCATTCATCAAATTTTCAAAACGAATCACAGCTCATTGATGCAATAGTCCAAGATGTCCTAAAAAAATTGGAAGATAACAACCCGGTTGCGCCACAATCCCATCTAGTTGGATTTGATCAAAATCTCGCCATTGTTGAATCATTAATGAAAATTACGTCACAAGAAGTTCTAGTTCTTGGTATTTGGGGTGTTGGTGGGATAGGCAAAACAACCCTGGCTCGAGCTACATTTGACAAATTCTCTTCTCAATTTGAAAGTTGCTGCTTCATAGAAAATGTGAGAGAGGAATCAACAAGGATCAATGGTTTGCGTTATTTGCGTCAAAAGCTTCTTTCTAAGCTATTAGACCAAGATGAAGATCTCCCCATAAAAATGAATTATGCAAAGAAGGCTATCACGGAAAAAGGTCTTGATTGTGCTTGA 687 0.3814 MIALVIFSKDYASSEWCLQELVKIMECKEASGQIVLPVFYCVDPSDVRRQKRTYADAFAHLELKFKDNSNELKNWRSALKKTADLSGYHSSNFQNESQLIDAIVQDVLKKLEDNNPVAPQSHLVGFDQNLAIVESLMKITSQEVLVLGIWGVGGIGKTTLARATFDKFSSQFESCCFIENVREESTRINGLRYLRQKLLSKLLDQDEDLPIKMNYAKKAITEKGLDCA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1459 228 Gene3D - 1 109 IPR035897 -
Prci12g1459 228 Gene3D - 110 225 IPR027417 -
Prci12g1459 228 Pfam TIR domain 1 117 IPR000157 GO:0007165
Prci12g1459 228 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 216 IPR044974 GO:0006952
Prci12g1459 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 218 IPR027417 -
Prci12g1459 228 ProSiteProfiles TIR domain profile. 1 111 IPR000157 GO:0007165
Prci12g1459 228 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 88 IPR035897 -
Prci12g1459 228 Pfam NB-ARC domain 131 206 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1459 Prci-Chr12 31110767 31112594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1459 2 204 WRKY Transcription Factor Family AT4G12020 30.542 5.66e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1459 - - pcin:129287864 447.203