Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1458 ATGGGATATGAAAAGCTATCAGAAATGACAGTTGCCTATGCTAAAGGCATTCCTCTAGCTTTAGAAGTTTTGGGTTCCCATTTTCATTCTAGAGATAAGGCATACTGGGAGAGTGAGCTCGAGAAACTCAGAAAGTATCCCCGTCCAGAAATTCAAAATATATTGAAAGCGCTAGAATCTTGTGGTTTCAAAGCAGTTAGTGGAATCCAAAATCTCATGGATAAATCTCTCATAAAACCAGGTTGGTTGCATGATGAAAATATCGAAATGCATGATTTGATACGACAAGTGGCTGAGCAAATAGTTCGTGTGGAATGTAAGAAAGATCCTGCATTACGTAGCCGATTAAATGATGCGGATGAAATTTGTAATGTATTGCAAAGGAACAAGGATCTTGTGAATTTAAAGATATTACATTTGAGGGGGTCCAAACAGTTGATGGAGCTGCCTGATTTCTCTAGGGCACATAATCTTGAAAAACCTCAAGAAATTCTCTTTATCATCAAAGAAATTGGGAAGTTTGTGTTTCGAGGGACTGGAGTTGAAATATTGCATTTGCTACCAATGGGAGGTTTCACGGAACTCAAAGATCTTAAGATTTTTGGTGAAAGATTAAGGAGCCTTCCGATAAGTGAGCTATGTAGCTTGACAAATCTTGAGGCATTTGAAATTTGGGATTTCCAGCAGGCCTTAACAAGCTTGAAACACATTTCCCTGAGAGACTGTGAGATGCTTAAGTCTATACTTGGACTTCCTCCCTTCCTTGAAGATTTAGATGCTGAAGGATGCACTTCATTGGAGATCATATTTTCTGACTCTCTAGTTCAAAATCCATGTCGATTTGATTTCCAGGAGTGTATAAAGTTGGATGAGTGTTCTCTTCGCTTCATTGAGAAACTAACTCATTTCTCTTTCACTTCAGCCAAGGCTAAGTGGCTTCCTAATGTTGGGGCTTGTTACGCGGGAAGCAGAGTTCCAAAATGGATGGAATATAAACATCAGACAGAGGCTTCCAATGCTATCGAATTCATTTGCAATCTCGAACGATCACCCACCATCTTAGGTTGCTGCGTTGTTCCTCCTCATCTCTGCTTACCTTCCGTGCAAAGTATCTATTGTGATTTCTCTTATAATGATAGCAACAAGTCCTGCAATTCATTTCCTTTATATTGTGGGTGTAAAATGGAGCCGTCTCATGTTTACATATGGAACCTGGAAGGGGAAGGAATTGAGAAGGGCTTCGTTTGGCGCTGGAACAGGTAA 1263 0.3998 MGYEKLSEMTVAYAKGIPLALEVLGSHFHSRDKAYWESELEKLRKYPRPEIQNILKALESCGFKAVSGIQNLMDKSLIKPGWLHDENIEMHDLIRQVAEQIVRVECKKDPALRSRLNDADEICNVLQRNKDLVNLKILHLRGSKQLMELPDFSRAHNLEKPQEILFIIKEIGKFVFRGTGVEILHLLPMGGFTELKDLKIFGERLRSLPISELCSLTNLEAFEIWDFQQALTSLKHISLRDCEMLKSILGLPPFLEDLDAEGCTSLEIIFSDSLVQNPCRFDFQECIKLDECSLRFIEKLTHFSFTSAKAKWLPNVGACYAGSRVPKWMEYKHQTEASNAIEFICNLERSPTILGCCVVPPHLCLPSVQSIYCDFSYNDSNKSCNSFPLYCGCKMEPSHVYIWNLEGEGIEKGFVWRWNR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1458 420 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 300 IPR044974 GO:0006952
Prci12g1458 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 56 IPR027417 -
Prci12g1458 420 PRINTS Disease resistance protein signature 14 28 - -
Prci12g1458 420 PRINTS Disease resistance protein signature 130 146 - -
Prci12g1458 420 Gene3D Ribonuclease Inhibitor 112 309 IPR032675 -
Prci12g1458 420 SUPERFAMILY L domain-like 132 317 - -
Prci12g1458 420 Gene3D - 2 59 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1458 Prci-Chr12 31108506 31111074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1458 46 126 WRKY Transcription Factor Family AT4G12020 35.366 7.05e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1458 - - pcin:129289245 868.996