Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1454 ATGGGTGCGTCTGCTTCTACTTCTGCTTCTTCTTCCCAAGTGAAATATGAAATTTTCATCAGATTTAGAGGTTCAGACATCAGATTTGGTTTTCTCAACAATTTGACAACGGCGTTGCGTGGAAAGCAGATGGATGTCTATGTGGATGACAGGCTTGAGAGAGGGGATGAAATATCCTTGGCACTTGAGGGAGCCATAGAAGGATCAAAGATTGCGTTGGCAGGGAATCAACAGATTGTGATTCCAATTTTTTACGATGTAGATCCAACAGATGTCAGGCATCAAAAAGGCACTTATGCAAAATCATTTAATGATCATGGACAGAGGTTCAAGGATAACATGGACAAGTTGAAAATGTGGAGATCTGTCTTGAAGAAAACCACAGCCTTATCTGGTCATCATTCATCAAAATTTCAAAATGAATTACAGCTCATTGATGCAATAGTCCAAGGTGTCCTAATAAAATTGGAAGATAACAACGCAGATGTGCCAAAATCCCAGATTGTTGGATTCGATCAAAATCTCACCAGTGTTGAATCATTAATGAAAACTACATCACAAGAAGTTCAAGTTCTTGGTATTTGGAGTGTTGGTGGGATAGGCAAAACAACCCTGGCTCGAGCTACATTTGACAAATTCTCTTCTCAATTTGAAAGCTGTTGCTTCATAGAAAATGTGAGAGAGGAATCAACAAGGATCAATGGTTTGAATTATTTACGTCAAAAGCTTCTTGCTAAGCTATTAGACCAAGATGAAGACCTCCCCATAAATATGAACGATGCAAGGAGAAGGCTGTCGCGGAAAAAAGTCTTGATTGTGCTTGATGATGTGTCCAATTCAAAGCAATTAAAAGATCTAGCTGGACAACAACCTTACTTGGGACCTGGCAGTAGAGTAATTATAACAAGTAGAGATAATCATGTTTTTAGGAGTGTAGAGATTCATGATGAATTTTGA 957 0.3866 MGASASTSASSSQVKYEIFIRFRGSDIRFGFLNNLTTALRGKQMDVYVDDRLERGDEISLALEGAIEGSKIALAGNQQIVIPIFYDVDPTDVRHQKGTYAKSFNDHGQRFKDNMDKLKMWRSVLKKTTALSGHHSSKFQNELQLIDAIVQGVLIKLEDNNADVPKSQIVGFDQNLTSVESLMKTTSQEVQVLGIWSVGGIGKTTLARATFDKFSSQFESCCFIENVREESTRINGLNYLRQKLLAKLLDQDEDLPINMNDARRRLSRKKVLIVLDDVSNSKQLKDLAGQQPYLGPGSRVIITSRDNHVFRSVEIHDEF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1454 318 SMART till_3 15 130 IPR000157 GO:0007165
Prci12g1454 318 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 309 IPR044974 GO:0006952
Prci12g1454 318 Pfam TIR domain 73 157 IPR000157 GO:0007165
Prci12g1454 318 Gene3D - 157 316 IPR027417 -
Prci12g1454 318 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 132 IPR035897 -
Prci12g1454 318 Gene3D - 75 156 IPR035897 -
Prci12g1454 318 Gene3D - 8 74 IPR035897 -
Prci12g1454 318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 314 IPR027417 -
Prci12g1454 318 Pfam NB-ARC domain 179 313 IPR002182 GO:0043531
Prci12g1454 318 PRINTS Disease resistance protein signature 191 206 - -
Prci12g1454 318 PRINTS Disease resistance protein signature 264 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1454 Prci-Chr12 31006238 31007449 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1454 11 314 WRKY Transcription Factor Family AT4G12020 30.094 7.15e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1454 - - pcin:129289239 446.432