Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1434 ATGGGTGCGTCTGCTTCTACTTCTGCTGCTTCTTCCCAAGTGAAATATGAAGTTTTCATCAGCTTTAGAGCTTCAGACATCAGATTTGGTTTTCTCAACAATTTGACCACGGCGTTGCGTGGAAAGCAGATAGATGTCTATGTGGATGACAGGCTGGAGAGAGGAGATGAAATATCGTCTGCACTTGACGAAGCCATAGAAGGATCAGTGATTGCATTAGTGATATTCTCTAAAGATTATGCTTATTCAAAGTGGTGCTTGCAAGAGCTTGTCAAAATCATGGAATGTAAGGCAGCAAATCAACAGATTAGGTTCAAGGATAACATGGACAGGTTGAAAATGTGGAGATCTGTCTTGAAGAAAATCGCAGCCTTATCTGGTCATCATTCATCAAAATTTCAAAATGAATCACAGCTCATTGATGCAATAGTCCAAGATGTCCTAAAAAAATTGGAATATAACAACCCAGATGTGCTAAAATCCCAGATTGTTGGATTCGATCAAAATCTCACCAGTGTTGAATCATTAATGAAAACTACGTCACAAGAAGTTCAAGTTCTTGGTATTTGGGGTGTTGGTGGGATAGGCAAAACAACCGTTGCTCGAGTTACATTTGTCAAATTCTCTTCTCAATTTGAAAGCTGTTGCTTCATAAAAAATGTGAGAGAGGAATCAACCAGGATCAACGGTTTGAGTTATTTGCGTCGAAAGCTTCTTTCTAAGCTATTAGACCAAGATGAAGACCTCCCTATAAATATGAACGATGCAAGGAGAAGGCTGTTGCGGAAAAAAGTCTTGATTGTGCTTGATGATGTGTCCAATTCAAAGCAATTAAAAGATCTAGCTGGACAACAACCTTACTTGGGACCTGGCAGTAGAGAAATGGTTGAGCAAATAGCTCATGTGGAATGTATGAAACATCCTGCATTATGTAGCCAATTAAAAGATGCAGATGAAATTTGTGATGTATTAGAAAGTAACATGGGAACTGATAAAATTGAAGGCATCATATTGGATTGGGATAGAATAAGACATTTATGA 1041 0.3842 MGASASTSAASSQVKYEVFISFRASDIRFGFLNNLTTALRGKQIDVYVDDRLERGDEISSALDEAIEGSVIALVIFSKDYAYSKWCLQELVKIMECKAANQQIRFKDNMDRLKMWRSVLKKIAALSGHHSSKFQNESQLIDAIVQDVLKKLEYNNPDVLKSQIVGFDQNLTSVESLMKTTSQEVQVLGIWGVGGIGKTTVARVTFVKFSSQFESCCFIKNVREESTRINGLSYLRRKLLSKLLDQDEDLPINMNDARRRLLRKKVLIVLDDVSNSKQLKDLAGQQPYLGPGSREMVEQIAHVECMKHPALCSQLKDADEICDVLESNMGTDKIEGIILDWDRIRHL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1434 346 SMART till_3 15 149 IPR000157 GO:0007165
Prci12g1434 346 Pfam TIR domain 15 102 IPR000157 GO:0007165
Prci12g1434 346 Pfam NB-ARC domain 174 281 IPR002182 GO:0043531
Prci12g1434 346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 295 IPR027417 -
Prci12g1434 346 ProSiteProfiles TIR domain profile. 14 151 IPR000157 GO:0007165
Prci12g1434 346 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 296 IPR044974 GO:0006952
Prci12g1434 346 Gene3D - 13 102 IPR035897 -
Prci12g1434 346 Gene3D - 103 155 IPR035897 -
Prci12g1434 346 Gene3D - 156 297 IPR027417 -
Prci12g1434 346 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 104 IPR035897 -
Prci12g1434 346 PRINTS Disease resistance protein signature 259 273 - -
Prci12g1434 346 PRINTS Disease resistance protein signature 186 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1434 Prci-Chr12 30710018 30711866 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1434 11 293 WRKY Transcription Factor Family AT4G12020 29.126 1.89e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1434 - - pcin:129289241 652.129