Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1433 ATGGATAAGGAAATATTTTTAGACATTGCCTTTTTCTTCATTGGAGAAGGCAAAAATCACGTTACTCAAGTGCTAGAGGCTTGTGGTTTCAGAGCAATTAGTGGAATTGAGAATCTCATGGATAAAGCTCTCATAAAAACAAATCATGATTGTAAAATTGTAATGCATGATTTGGTTCAAGAAATGGGTGAGCAAATAGTTCGTGAGGAATGTTCAAAATATCCTGAATTACGTAGCCGATTAAATGATGCGGATGAAATTTGTGATGTACTGCAAAGGAACATGGGAACTGATAAAATTGAAGGCATCATATTGGATTGGAATAGAATAAATCATTTACGATTGAGCCCCGATACCTTCACAAAGATGACAAATTTAAGAATTCTCAAAATTTGTCATCCTTGGTATTCGTTCGAGGAGAAAAAAAATTCAAAGCTTTTTTATTATCTTGGCTCTTTTCCTAATAAATTAAGGTATTTTCATTGGGATCTATATCCATTGGAGTTTTTGCCATTAGAAGGCTATTGTTTCAAGAACCTTGTTGTGCTACGCATGCAACACAGCAATATTAAAAAGCTTTGGGATGGAGTGCAGGATCTTGTGAATTTAAAGATGTTAGATTTGAGGAGGTCTAGACAATTGATGGAGCTGCCTGATTTCTCTAGGGCACATAATCTTGAAGAAGTATATCTCTCGGGATGTGAAAGTTTATGTAGTGTTCATCCATCTATTTTTTGTCTTCAATCTCTTGTTACATTGGATGTATCTCATTGCGAGAAATCAGAGAGTCTTTATCATGGCTCTTTTCCTAATAAATTAAGGCATTTTTCTTGGGAGCAATATCCACTGGAGTCTTTGCCGTTGGGGCTTTGTATTAAGAACCTTGTCGAACTTTGTATAATGGACAGCAATATTAAAAAGCTTTGGGATGGAGTGCAGGATCTTATGAATCTAAAGACGTTAAGTTTGTCTGGGTGTAAACAATTGGTGGAGCTGCCTAATTTCTCTATGGCACGTAATCTTGAAGAAGTTGATCTCGGGGGTTGTGAAAGTCTACATAGTGTTCATCCATCTATTTTATCTCTCCAATCTCTTGTTGGATTGAATGTCTCTGATTGCAAGGAATTAGAGAGCCTTGAAAGTGAGACTCATTTAGAATCTCTCTCTTACCTTGGTGTTGAGGATTGTCAAAGCCTCAAGAAATTCTCTGTGTCATCAAAGAAATTGGACGGTTTGTGTTTCGATGGGACTGAAGTTGAAATATTGCATTTACTGCCAATGGGAGGTTTCACAGAACTCAGATTGCTTGAGATTTATGGTGAAAGATTAAGGAGCCTTCCGATAAGTGAGCTATGTAGCCTGACAAATCTTGAGGGATTTCAAATTTGGGATTTCCAGCAGATGCAGTTACTTGGTGGAAATCCCTGA 1428 0.3704 MDKEIFLDIAFFFIGEGKNHVTQVLEACGFRAISGIENLMDKALIKTNHDCKIVMHDLVQEMGEQIVREECSKYPELRSRLNDADEICDVLQRNMGTDKIEGIILDWNRINHLRLSPDTFTKMTNLRILKICHPWYSFEEKKNSKLFYYLGSFPNKLRYFHWDLYPLEFLPLEGYCFKNLVVLRMQHSNIKKLWDGVQDLVNLKMLDLRRSRQLMELPDFSRAHNLEEVYLSGCESLCSVHPSIFCLQSLVTLDVSHCEKSESLYHGSFPNKLRHFSWEQYPLESLPLGLCIKNLVELCIMDSNIKKLWDGVQDLMNLKTLSLSGCKQLVELPNFSMARNLEEVDLGGCESLHSVHPSILSLQSLVGLNVSDCKELESLESETHLESLSYLGVEDCQSLKKFSVSSKKLDGLCFDGTEVEILHLLPMGGFTELRLLEIYGERLRSLPISELCSLTNLEGFQIWDFQQMQLLGGNP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1433 475 SUPERFAMILY "Winged helix" DNA-binding domain 2 90 IPR036390 -
Prci12g1433 475 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 268 405 IPR044974 GO:0006952
Prci12g1433 475 Gene3D Ribonuclease Inhibitor 269 418 IPR032675 -
Prci12g1433 475 Gene3D Ribonuclease Inhibitor 91 268 IPR032675 -
Prci12g1433 475 SUPERFAMILY L domain-like 55 463 - -
Prci12g1433 475 Pfam Leucine Rich Repeat 179 198 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1433 Prci-Chr12 30663120 30664911 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1433 2 426 WRKY Transcription Factor Family AT5G45050 32.280 3.72e-47 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1433 - - pcin:129289240 955.281