Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1432 ATGGCTGTGTTTGCTTCTGCTTCTTCTTCCCGAGTGAAATATGAAGTTTTCATCAGCTTTAGAGGTTCAGACATCAGATTTGGTTTTCTCGGCCATTTGACAACGGCGTTGCGTGGAAAGCAGGTTGATGTCTATGTGGATGAGAGGCTGGAGGGAGGAGATGAAATATCGTCTGCACTTGAGGAAGCCATAAAAGGATCAAAGATTGCGTTGGTCATATTCTCAAAAGATTATGCTTCTTCAACGTGGTGTCTGAACGAGCTTGTCAAAATCATGGAATGTAACGAAGCAAATGGACAAATTGTGTTACCAGTTTTCTATTATGTCAATCCTTCAGATGTCAGGCATCAAAAAGGCACTTATGCAGAATCATTTGCACATCTTGAACAGAAGTTCAAGGATAACTTGAACCAGTTGCCAATTTGGGGATGTGTCTTGAAAATTTTTGCCTACTTATTTGGTTATCATTCATTTAATGATCATGAACAAAGGTTCAAGGATAATATGGGCAAGTTGAAAATTTGGAGATCTGTCTTGAAGAAAACCGCAGGCTTATCTGGTTATCATTCATCAAATTTTCAAAACGAATCACAGCTCATTGATGCAATAGTCCAAGATGTCCTAAAAAAATTGAAAGATCACAACCTAGTTGTGCCAAAATCCCAGCTTGTTGGATTTGATCACAATCTCGACATTGTTGAATCATTAATGAAAATTACGTCACAGGAAGTTCGAGTTCTTGGTATTTGGGGTGTTGGTGGCATAGGCAAAACCACCTTGGCTAGAGCTACATTTGACAAATTCTCTTCTCAATTTGAAAGCTGTTGCTTCTTAGAAAAAGTGAGAGAGGAATCAACAAGGATCGATGGTTTGAGTCGCTTGCGTCAAAAGCTTCTTTCTGAGCTATTACACCTAGACAAAGATGTCACCATAGAAGAGGATGGTGCAAGGAGAAGACTGTCATGGAAAAAGGTCTTGATTGTGCTTGATGATGTGTCCGATTCAAAGCAATTAAAAGATCTAGCTGGACAGCAACTTTACTTGGGACTTGGCAGTAGAGTAATTGTAACAAGTAGAGACAAGCATGTTTTTAGGAGTGGAGAGATTCATGATGAATATATACATGAAGTCAAGGAGTTGAATTTTGAAGAATCACTAAAACTTTTTAGTTTACATGCCTTCAAACAAACTCACCCCAGTATGGGATATGAAAAGCTATCAGAAATGACAGTTGCCTATGCTACAGGCATTCCTCTAGCTTTAGAAGTTTTGGGTTCCCATTTTCATTCTAGAGATAAGGCATACTGGGAGAGTGAGCTCAAGAAACTCAGAAAGTATCCCCGTCCAAAATTCAAAATATATTGA 1365 0.3883 MAVFASASSSRVKYEVFISFRGSDIRFGFLGHLTTALRGKQVDVYVDERLEGGDEISSALEEAIKGSKIALVIFSKDYASSTWCLNELVKIMECNEANGQIVLPVFYYVNPSDVRHQKGTYAESFAHLEQKFKDNLNQLPIWGCVLKIFAYLFGYHSFNDHEQRFKDNMGKLKIWRSVLKKTAGLSGYHSSNFQNESQLIDAIVQDVLKKLKDHNLVVPKSQLVGFDHNLDIVESLMKITSQEVRVLGIWGVGGIGKTTLARATFDKFSSQFESCCFLEKVREESTRIDGLSRLRQKLLSELLHLDKDVTIEEDGARRRLSWKKVLIVLDDVSDSKQLKDLAGQQLYLGLGSRVIVTSRDKHVFRSGEIHDEYIHEVKELNFEESLKLFSLHAFKQTHPSMGYEKLSEMTVAYATGIPLALEVLGSHFHSRDKAYWESELKKLRKYPRPKFKIY 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1432 454 Gene3D - 10 208 IPR035897 -
Prci12g1432 454 SMART till_3 13 152 IPR000157 GO:0007165
Prci12g1432 454 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 138 IPR035897 -
Prci12g1432 454 Gene3D - 209 374 IPR027417 -
Prci12g1432 454 PRINTS Disease resistance protein signature 414 428 - -
Prci12g1432 454 PRINTS Disease resistance protein signature 319 333 - -
Prci12g1432 454 PRINTS Disease resistance protein signature 246 261 - -
Prci12g1432 454 ProSiteProfiles TIR domain profile. 12 211 IPR000157 GO:0007165
Prci12g1432 454 Pfam TIR domain 13 142 IPR000157 GO:0007165
Prci12g1432 454 Gene3D - 379 453 IPR042197 -
Prci12g1432 454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 447 IPR027417 -
Prci12g1432 454 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 445 IPR044974 GO:0006952
Prci12g1432 454 Pfam NB-ARC domain 232 437 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1432 Prci-Chr12 30661558 30663093 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1432 9 426 WRKY Transcription Factor Family AT4G12020 28.605 3.33e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1432 - - pcin:129289239 905.59