Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1379 ATGTCCATGAATATTCCATTAAAGGATTTATTTGTGGCGGGGACTAACACAACATCGAGCAAACTCGAATGGACAATGGCAGAATTAATACGAAACCCAAAGAAAATGGTGAATGTAAGAACAAAACTCCAACATGTTCTTGGTAATAAAAATAATACTTTCAATCTTGAAGAGACTATGAGCTCAAAGTTGCCTTACCTACAAGCAATACAAAAAGAGACTTTACACGTACACCCACCAGTACCATTTCTACTACCTTGCAAGGCAATTTGTGATGTAGAGTTATGTGGCTTCTTAGTTTCCAAAAACGCACAGATTTTAGTAAATGTGTGGGCTATGGAAAGAGACCCAACCATATGGGATAAACCTAATTCATTTATCCCTAAAAGGTTTTTGGAAAGTGAGATTGATTTTAAGGCTAATGATTTTAAGTTTATTCCATTTGGTGCTGGGAGGAGGATGTGTCCTGGGTTGCCCTTGGCTTCTAGGGTACTTCCCTTTATGTTGGCATCTCTTATATATCACTTTGATTGGAAGGTTCCATATGGGATAAAGCCAGAGGATATGGATATGAGTCAAAACTACGGGATTTTATTGCATAAGGCTCAACCTCTGAGAGCTGTTCCTGTCAAAATTTTGGTAATTATGAATTTGTTAATTTCATTCATGATGAAGAATTAA 681 0.3686 MSMNIPLKDLFVAGTNTTSSKLEWTMAELIRNPKKMVNVRTKLQHVLGNKNNTFNLEETMSSKLPYLQAIQKETLHVHPPVPFLLPCKAICDVELCGFLVSKNAQILVNVWAMERDPTIWDKPNSFIPKRFLESEIDFKANDFKFIPFGAGRRMCPGLPLASRVLPFMLASLIYHFDWKVPYGIKPEDMDMSQNYGILLHKAQPLRAVPVKILVIMNLLISFMMKN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1379 226 PRINTS P450 superfamily signature 146 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PRINTS P450 superfamily signature 13 30 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PRINTS P450 superfamily signature 69 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PRINTS P450 superfamily signature 155 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 SUPERFAMILY Cytochrome P450 8 209 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 148 157 IPR017972 GO:0005506|GO:0016705
Prci12g1379 226 Gene3D Cytochrome P450 6 211 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 211 - -
Prci12g1379 226 PRINTS E-class P450 group I signature 2 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PRINTS E-class P450 group I signature 155 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PRINTS E-class P450 group I signature 22 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PRINTS E-class P450 group I signature 68 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PRINTS E-class P450 group I signature 145 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 PRINTS E-class P450 group I signature 109 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 Pfam Cytochrome P450 8 201 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g1379 226 FunFam Predicted protein 11 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1379 Prci-Chr12 29053859 29057032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1379 7 211 Cytochrome P450 AT1G33720 54.146 3.52e-80 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1379 - - pcin:129289573 383.645