Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1363 ATGGCGGCTGATTTTTCTGCTCTGAGTGCAACGAGGTCTACGGCGGAAAATTCCCTGGAGAAACGATACCGTTCGATATTCGATCTCACGTCTGATTTTTTCTACTCATGTCGCCTTCTTGCTTCTCCTCAATCGTCCGTTTCGGACAACCTTCAGAATTGTCAGGACTCAGCGCATGAAACCCTTGATCCTATTGAGGACGACGGTAATGGCTCCCAAGGCGTCGTTGTTTCATTGCCCAGGTGGACTTGCAATACTTGCAAGGCTCAATTTGAGTCCCTTCAAGACCAGCGTTTGCATTTCAAATCGGATATTCATCGGTTCAATGTGAAGTTGACAATGGCTGGAAAGAATATTGTGAAGGAAGAAGATTTCGAGATGTTGACACCTGATTCTATCAAAGACTATGATGTTTCGAGCATATCAGGTTCAGAAGATGATGATGATGATAACGAAATTGAGATTCCAAGACAACATGAAGTTGGTAAAAAATTAAATGAAAGTTTTAGGCAGAAGTTATTTATCTGCCTTCCGTCAGGGGAGAGAGTTTCTGTTTGGAAATGCTTAATAATGAATATGGGTGAGAATGTATTAAATGAAAATGAAGTGATTGAGAGGTTGAAGTCTTTGACTCTTGAGCCCAGGAATAATTCTCACTTGAGAATTGTGCTGCTTGCATCCGGTGGGCACTTTGCAGGGTGTGTGTTTGATGGTGACAGGCTTGTGGCTCACAAGACATTCCACAGATATGTTGTGAGGGCCAAGGCAGGAAAAAAACAGTCATCAAAAGATGCTACTGGTAGAGCTGCACATTCTGCTGGGGCTTCACTTCGTCGCCACAATGAACTTGCATTAAAGAAGGAAATTCAAGAGCTGCTTACTTCTTGGAGAACTTATTTTGATGCTTCGAATTGCATATTCCTACATGCTCCCTCAAGTAGTCGGCAACTGTTCTTTGATGGAGAGAGACCATATTTTAGCAATCAGCATAATGTTATTAGAAACATTCCATTGACTGTTCGAAGGCCTACTTTAAGAGAAGCAAAGCGTGTATATAGCCAGTTGACTCAAGTATCCAATGAAGCAGAAGAGGATTTAGAGTCAACATCCATTACCGTAAGAAACACTGACCGAACCATTGACAAAGAGGCCTCTGCTAACTTGGATAGCAATGATAAAAGTGAGGCATGTTCGAGTAAACAAGATAATTATGAACTCTGTATTTCAAGTGCAAGTGAGAGTGAAAGCGGGATGGTAGGTAAATCAACCCCTTTACATCAGGCTTCACAATCTGGTGATTCACACAAGGTTTTGGAGCTGCTGGAACAGGGCAATGATCCTTGCATCAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCACATGATAAGGAAGTGAGGAATACTTTTAGAAGATTCATGGCATCAAACCTTGAAAAATGGGACTGGTATGCGGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGCTAAACAGGCTGAAAAAGATGCCAAGAGAAAAGCCAGAGCAAAAGAATTAAAAAAATTGCGTAAAGCAAAAGAAAAGAAGGCCCAGGCTGAAGCTGCTAAGAATGCTTCCAAAACTGCAGAAAGCCATGTGAATTCTTCAACTTCTATTACTCGCAAGGGACAATTTCCACTCAACAGTGGGTTGAAATTATCTGAAGAGGTTAGATACTGA 1716 0.4172 MAADFSALSATRSTAENSLEKRYRSIFDLTSDFFYSCRLLASPQSSVSDNLQNCQDSAHETLDPIEDDGNGSQGVVVSLPRWTCNTCKAQFESLQDQRLHFKSDIHRFNVKLTMAGKNIVKEEDFEMLTPDSIKDYDVSSISGSEDDDDDNEIEIPRQHEVGKKLNESFRQKLFICLPSGERVSVWKCLIMNMGENVLNENEVIERLKSLTLEPRNNSHLRIVLLASGGHFAGCVFDGDRLVAHKTFHRYVVRAKAGKKQSSKDATGRAAHSAGASLRRHNELALKKEIQELLTSWRTYFDASNCIFLHAPSSSRQLFFDGERPYFSNQHNVIRNIPLTVRRPTLREAKRVYSQLTQVSNEAEEDLESTSITVRNTDRTIDKEASANLDSNDKSEACSSKQDNYELCISSASESESGMVGKSTPLHQASQSGDSHKVLELLEQGNDPCIKDERGRTPYMLAHDKEVRNTFRRFMASNLEKWDWYAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEAAKNASKTAESHVNSSTSITRKGQFPLNSGLKLSEEVRY 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1363 571 Pfam Bacteroidetes VLRF1 release factor 222 359 IPR041175 -
Prci12g1363 571 SUPERFAMILY beta-beta-alpha zinc fingers 69 115 IPR036236 -
Prci12g1363 571 Coils Coil 496 541 - -
Prci12g1363 571 Coils Coil 345 365 - -
Prci12g1363 571 MobiDBLite consensus disorder prediction 536 557 - -
Prci12g1363 571 ProSitePatterns Zinc finger C2H2 type domain signature. 84 106 IPR013087 -
Prci12g1363 571 MobiDBLite consensus disorder prediction 499 513 - -
Prci12g1363 571 MobiDBLite consensus disorder prediction 495 557 - -
Prci12g1363 571 SUPERFAMILY Ankyrin repeat 421 473 IPR036770 -
Prci12g1363 571 Gene3D - 378 482 IPR036770 -
Prci12g1363 571 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 18 538 IPR047139 -
Prci12g1363 571 ProSiteProfiles Ankyrin repeat profile. 420 452 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1363 21 525 C2H2 Transcription Factor Family AT1G01930 56.979 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1363 K26089 - gmx:100808912 650.973