Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1362 ATGTCGGTCACTCTGCATACCAACCTCGGCGATATCAAGTGCGAGATCTTTTGCGACGAGGTGCCCAAGGCCTCCGAGAATTTTTTAGCACTTTGTGCAAGTGGCTATTATGATGGGACAATTTTTCACCGCAATATCAAAGGTTTTATGATTCAAGGTGGAGACCCAACTGGTACTGGCAAAGGGGGCACCAGTATATGGGGAAAGAAATTTAACGATGAGATTAGAGAATCTCTTAAGCACAATGCTAGGGGGATATTGTCAATGGCTAATAGTGGTCCAAACACTAATGGAAGCCAATTCTTCATAACGTATGCAAAGCAGCCACATTTGAATGGACTGTATACGGTGTTTGGCAAAGTAATTCATGGATTTGAAGTTCTTGATCTGATGGAAAAGGCTTAA 405 0.4247 MSVTLHTNLGDIKCEIFCDEVPKASENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFITYAKQPHLNGLYTVFGKVIHGFEVLDLMEKA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1362 134 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Prci12g1362 134 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Prci12g1362 134 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Prci12g1362 134 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 IPR002130 GO:0000413|GO:0003755
Prci12g1362 134 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
Prci12g1362 134 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 IPR020892 GO:0003755|GO:0006457
Prci12g1362 134 Gene3D - 1 134 IPR029000 -
Prci12g1362 134 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 6 134 IPR002130 GO:0000413|GO:0003755
Prci12g1362 134 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 133 IPR044666 -
Prci12g1362 134 FunFam Peptidyl-prolyl cis-trans isomerase 1 134 - -
Prci12g1362 134 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 133 IPR002130 GO:0000413|GO:0003755
Prci12g1362 134 CDD Cyclophilin_PPIL3_like 1 133 - -
Prci12g1362 134 SUPERFAMILY Cyclophilin-like 1 133 IPR029000 -
Prci12g1362 134 PIRSF Peptidylpro_ismrse 1 134 IPR024936 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1362 Prci-Chr12 28157353 28163620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1362 3 132 U-box Gene Family AT5G67530 58.462 8.40e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1362 K12734 - gmx:100306466 271.552