Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1347 ATGGAACCAATATTACCTTCCTTTCTTAGTAGAGACCTTCATCTTCATCTTCATAATCACCAGAGTGATAACCTTCAAGATCATGAGCAAACCAGGAATGGCGGCAGCGTAGATGGCCGGCGCCAGAAGCAACAAAGCGATAAAAACACTGCTGTCGCCGCTACTGGCGGTGCTAAGGCCGGTGCGGTGGAGGGAAGTGAGATAGGTAGAAGACCTCGAGGTAGACCAGCCGGGTCAAAGAACAAGCCGAAGCCTCCGGTCGTAGTAACTCGGGATAGTGCTAACGCTCTCCGATCTCATGTTGTTGAGATCGCCGACGGCTCTGATATCATCGACAGCCTTACCACCTTCGCGAAGAGGAGACTGCGTGGGGTTTGTATCCTAAATGGAAGCGGCACCGTCAATAACGTCAATCTCCGGCAGCCAGATTCGGCCGAAGCGGTGGTCACTTTGCACGGGAGATTCGAGATTTTATCTATTTCAGGCTCGTTCCTCCCGCCGCCGGCTCCACCTGCAGCCTCTGGATTGAAGATATATTTGGCCGGAGGTCAAGGGCAGGTGGTCGGAGGCAGTGTGGTGGCGCCGTTGCTCGCTGCCGGACCGGTCATTATCATGGCAGCTTCGTTTGGCAATGCAGCTTATAGTAGGTTGCCGTTGGAGAAGGAGGAGGAAGCGGCGGAGAAGCCACCGGAGAGCGGCGGTGAACGGCAGCAGCTAGCGGCGGATCGCAACAAATCACTACTTCATGGGGTGCCGCACAATCCTTTGGATTCATTTCAATTATCAGATTGGGGTGAATGCTCTCGTCCGTCATTTTAA 819 0.5385 MEPILPSFLSRDLHLHLHNHQSDNLQDHEQTRNGGSVDGRRQKQQSDKNTAVAATGGAKAGAVEGSEIGRRPRGRPAGSKNKPKPPVVVTRDSANALRSHVVEIADGSDIIDSLTTFAKRRLRGVCILNGSGTVNNVNLRQPDSAEAVVTLHGRFEILSISGSFLPPPAPPAASGLKIYLAGGQGQVVGGSVVAPLLAAGPVIIMAASFGNAAYSRLPLEKEEEAAEKPPESGGERQQLAADRNKSLLHGVPHNPLDSFQLSDWGECSRPSF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1347 272 Gene3D - 97 226 - -
Prci12g1347 272 FunFam AT-hook motif nuclear-localized protein 97 224 - -
Prci12g1347 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 238 IPR014476 GO:0003680
Prci12g1347 272 MobiDBLite consensus disorder prediction 21 88 - -
Prci12g1347 272 ProSiteProfiles PPC domain profile profile. 94 230 IPR005175 -
Prci12g1347 272 MobiDBLite consensus disorder prediction 220 272 - -
Prci12g1347 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 210 IPR005175 -
Prci12g1347 272 PIRSF ESCAROLA 9 258 IPR014476 GO:0003680
Prci12g1347 272 MobiDBLite consensus disorder prediction 21 45 - -
Prci12g1347 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 224 - -
Prci12g1347 272 CDD DUF296 98 165 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1347 Prci-Chr12 27688489 27689932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1347 70 224 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 67.742 1.15e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1347 - - pcin:129288874 506.138