Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1282 ATGTCTCTGCTTGTTCCACTTTCACTCTTCTTCTTCGCCATTGTTCCTGCTTCTTCATCTTCAGAGCTTGACACTCTCATGACCATCAAACACTCACTCGACCCGCAGAACATATTTCTGACCTCATGGACTCCGAATTCCGACCCATGTAGCGGCGGTTTCGAGGGCGTGGCGTGCAACGAACAAGGCCACGTCGCTAATATTTCGCTTCAAGGAAAAGGTCTCTACGGCAGCTTACCGGCGGCCATCGGCGACCTCAAGAGTTTGACAGGTCTCTATCTTCACTTTAATGCTCTGAGTGGGACGATACCCAAAGAGATTGCAAATTTGAGTGACCTCACCGATTTGTATCTCAATGTCAATAATCTCTATGGTGATATCCCTCATGAAATTGGACACATGTCTAATCTTCAAGTTTTGCAGCTTTGTTGTAACAAGTTTACTGGGAGTATTCCCACAGAATTGGGAAACTTGGAGAGACTCAGTGTTGTTGCTCTACAAAATAATGAATTGAGTGGTGCAATTCCTGCAAGTTTGGGTCAGCTACAGTCGCTAACAAGGTTGGATCTGAGCTTTAATAATCTATTTGGTCCTATTCCAGTGAGATTAGCTGATGCCCCCAAACTAGAAAGCCTTGATATTCAAAACAATTCTCTCTCAGGCAATGTCCCTCCAGCTCTTGGAAGACTGAAGGGCGGTTTCCAGTACATCAACAATCCTGGCTTATGTGGGACTGAGTTTACAAATTTGCTGGCTTGTAAATCTTTGTTTGACCCAAGCAAGCCTGAACCATTCGAACCTGATAACTTTTCCACCCCGAAAGGTCTTCCTGCTTCAGTTGATCCAAAAGATGAAAGAAAGTGCAGTGATGATGAAACCCACTGTCAAAAATCACTGCAATACTCAAAAATGGCTCTGGTTTTTGGTGTGATTGGAATTATTGTTGCTTCCACAGTTTCTGGACTTTCCATGTTCGTGTGGTATCATCGTCATCAAAAACAAAAGATTGGCTGCAGTATTATTGATGCTTCTTCTCCTAGTAGTAGCCTGCAAGTTTGCAGGAAAAATAATAATGCAGCTTCTTTGATCAGTTTAGAGTATTCTAATGGATGGGATCCATTAGCCAAAGGAAAAAGTACTTATTCCCAGGAAATTCTAGAGAGCTTTACGTTTAATCTAGAGGAAGTAGAACGTGCAACTCAGTGCTTCTCTGAGGTGAACTTGTTGGGGAAGAGTAGTAATAATAATTATTTGTGTGGAATTTACAAGGGGATTTTGAGAGACAGATCACATGTGGTTGTGAAGTGTATCAACAAGACAAGCTGCAAGTCTGATGAAACTGAGTTCTTGAAAGGGTTGAAGATAATGACCTCAATCAAACATGAAAATCTTGTCCGTTTCAGAGGATTTTGCTGTTCTAAAGGCAGAGGAGAGTGCTTCCTTGTTTATGATTTTGCCCCAAATGGGAATTTGTCTCAGTATTTGGATCTCAAGAAAGGGGATTCTAGGGTTCTTGAATGGTCTACCAGAGCATCCATCATCCACGGTATTGCTAGAGGTATTGGTTATCTTCATGGAAAGAATAAGGGAAGAAAACAACCCCTAGTTCACCAGAACATATCAGCTGATAATGTGCTGCTTGATGCACATTATAATTCATTACTTGCAGATTCAGGATTGCACAAACTTCTTGCAGATGATGTTATCTTCTCCACACTGAAAGCTTCTGCTGCCAAGGGCTACCTTGCTCCGGAATACGCCACCACCGGTTGTTTAACAGAAAAGAGCGACATTTATGCTTTCGGAGTGATAGTTTTCCAGCTTCTTACTGGAAAGAGTGATATTACTCAGTTATATAATCATCACCAGGCAGAAACATCATCATCATCATCATCATGTGGTTTTAATGATATGGTTGATGACAACCTGGAAGGGAGATTCTCAGAATCAGAAGCAGCTAAACTGGGGAGGATTGCTCTAGTTTGCACTCATGAATCACCCCATGAAAGGCCATCTATAGGACATGTAATGCAAGAACTGTCGGAGAAGTGA 2052 0.4206 MSLLVPLSLFFFAIVPASSSSELDTLMTIKHSLDPQNIFLTSWTPNSDPCSGGFEGVACNEQGHVANISLQGKGLYGSLPAAIGDLKSLTGLYLHFNALSGTIPKEIANLSDLTDLYLNVNNLYGDIPHEIGHMSNLQVLQLCCNKFTGSIPTELGNLERLSVVALQNNELSGAIPASLGQLQSLTRLDLSFNNLFGPIPVRLADAPKLESLDIQNNSLSGNVPPALGRLKGGFQYINNPGLCGTEFTNLLACKSLFDPSKPEPFEPDNFSTPKGLPASVDPKDERKCSDDETHCQKSLQYSKMALVFGVIGIIVASTVSGLSMFVWYHRHQKQKIGCSIIDASSPSSSLQVCRKNNNAASLISLEYSNGWDPLAKGKSTYSQEILESFTFNLEEVERATQCFSEVNLLGKSSNNNYLCGIYKGILRDRSHVVVKCINKTSCKSDETEFLKGLKIMTSIKHENLVRFRGFCCSKGRGECFLVYDFAPNGNLSQYLDLKKGDSRVLEWSTRASIIHGIARGIGYLHGKNKGRKQPLVHQNISADNVLLDAHYNSLLADSGLHKLLADDVIFSTLKASAAKGYLAPEYATTGCLTEKSDIYAFGVIVFQLLTGKSDITQLYNHHQAETSSSSSSCGFNDMVDDNLEGRFSESEAAKLGRIALVCTHESPHERPSIGHVMQELSEK 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1282 683 Pfam Leucine rich repeat N-terminal domain 20 60 IPR013210 -
Prci12g1282 683 MobiDBLite consensus disorder prediction 264 289 - -
Prci12g1282 683 Pfam Leucine Rich Repeat 208 228 IPR001611 GO:0005515
Prci12g1282 683 FunFam Leucine-rich repeat receptor-like kinase 21 132 - -
Prci12g1282 683 Gene3D Ribonuclease Inhibitor 19 252 IPR032675 -
Prci12g1282 683 Pfam Protein tyrosine and serine/threonine kinase 421 680 IPR001245 GO:0004672|GO:0006468
Prci12g1282 683 CDD STKc_IRAK 409 682 - -
Prci12g1282 683 FunFam Protein NSP-INTERACTING KINASE 2 133 254 - -
Prci12g1282 683 PANTHER LEUCINE RICH REPEAT KINASE 2 73 682 - -
Prci12g1282 683 Pfam Leucine rich repeat 135 195 IPR001611 GO:0005515
Prci12g1282 683 SUPERFAMILY L domain-like 19 231 - -
Prci12g1282 683 FunFam Protein NSP-INTERACTING KINASE 2 375 485 - -
Prci12g1282 683 ProSiteProfiles Protein kinase domain profile. 403 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1282 683 Gene3D Phosphorylase Kinase; domain 1 373 485 - -
Prci12g1282 683 Gene3D Transferase(Phosphotransferase) domain 1 486 683 - -
Prci12g1282 683 SUPERFAMILY Protein kinase-like (PK-like) 381 680 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1282 Prci-Chr12 26679496 26685344 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1282 2 520 Miscellaneous Gene Families AT4G22730 48.689 1.23e-168 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Prci12g1282 PK_Tyr_Ser-Thr 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1282 - - jre:108981102 853.203