Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1280 ATGCCTATCTATAACTTCAATTTCAAATATTTTGTGGTTCTCTTTGGTGCCACTTATGCTTGTCTCTTCCCAATCTCTACAGCTTTTGATCCACATCTAGATGATGAAAAGGTGTCCATGGCTATTATTTCCTTCGCAAGTGGATTTTTCATTACATGTGTTCTTGCGATTACAATTCTGGTCATAATCAAATTATTTAGAAGGAAACTGAGAAAACTTATGGTTCACAGAATCAAATATGAGGAAACGCAGGTCAAGAAGAATGGAGATTTCTTCTCAATATGGAACTATGATGGTAAAATCGCCTTTGAAGATATCATTGAAGCGACAGAAGATTTTGATATGAAGTGTTGTATTGGAACAGGTGCTTATGGAAGTGTTTATAAGGCACGACTTCCTTGTGGCAAAATTGTAGCAGTGAAAAAACTTCACAAAAGGGAATCGGAAAATCAATCTTTTGTCAAGAGCTTTTGCAATGAAATCAAGATTCTAACAGCTATTCGTCATCGAAATATCGTGAAGCTTCATGGCTTTTGTTTGCATAATCAGTTCATGTTTTTGGTTTATGCATTCATGGAGAGTGGTAGCTTGTTATGTGTCTTAAGTGATGATGACGAGGCTCAAATGTTGAATTGGAACAAGAGATTCAATATCGTTAATGAGATATGTCATGCTATCAAGTATATGCATCATGATTGTGTAGCACCAATTCTTCATCGAGACATAACAAGTAATAATATTTTGTTGAACTCAAGAATGGAAGCATTTGTCTCGGACTTTGGCACTGCTAGATTCCTCGATCCTGATGCATCAAATCAAAGTCTACAACTTGGTACTTATGGATATATTGCTCCAGAATTAGCTTACAAATTAACCATGACCGAGAAGTGTGATGTTTATAGTTTTGGAGTAGTTGTCTTAGAAACTATGATGGGCAAACATCCTGGAGAACTAATTTCATGTTTGGAGAAGGAGTCAACTCAGAAGATAATGCTAAGAGATATCTTAGACGCGCGAATCCCTGAACCTCGCACCAGAAAAGATATTTGGGATGTAATTCTTGTGATGAGCATTGCATTAGCATGTATTTGTGGTGAACCAGATTGTAGGCCATCAATGAAGCAAGTGGCTCAGAAACTTTCACTTTCTAGGCCACTTTTCACACTTCCTTTCAATGATATTTCAATTCATCACTTGATGAGTCAAGACATAATTTCACTTATATAA 1227 0.3635 MPIYNFNFKYFVVLFGATYACLFPISTAFDPHLDDEKVSMAIISFASGFFITCVLAITILVIIKLFRRKLRKLMVHRIKYEETQVKKNGDFFSIWNYDGKIAFEDIIEATEDFDMKCCIGTGAYGSVYKARLPCGKIVAVKKLHKRESENQSFVKSFCNEIKILTAIRHRNIVKLHGFCLHNQFMFLVYAFMESGSLLCVLSDDDEAQMLNWNKRFNIVNEICHAIKYMHHDCVAPILHRDITSNNILLNSRMEAFVSDFGTARFLDPDASNQSLQLGTYGYIAPELAYKLTMTEKCDVYSFGVVVLETMMGKHPGELISCLEKESTQKIMLRDILDARIPEPRTRKDIWDVILVMSIALACICGEPDCRPSMKQVAQKLSLSRPLFTLPFNDISIHHLMSQDIISLI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1280 408 PANTHER LEUCINE RICH REPEAT KINASE 2 47 382 - -
Prci12g1280 408 Gene3D Transferase(Phosphotransferase) domain 1 192 385 - -
Prci12g1280 408 SUPERFAMILY Protein kinase-like (PK-like) 94 380 IPR011009 -
Prci12g1280 408 Coils Coil 404 408 - -
Prci12g1280 408 Gene3D Phosphorylase Kinase; domain 1 74 191 - -
Prci12g1280 408 FunFam Leucine-rich repeat receptor protein kinase MSP1 76 191 - -
Prci12g1280 408 ProSiteProfiles Protein kinase domain profile. 113 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1280 408 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Prci12g1280 408 ProSitePatterns Tyrosine protein kinases specific active-site signature. 237 249 IPR008266 GO:0004672|GO:0006468
Prci12g1280 408 Pfam Protein kinase domain 118 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1280 Prci-Chr12 26632989 26634803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1280 66 285 Receptor kinase-like Gene Family AT4G08850 50.673 1.83e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1280 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1280 - - pcin:129289199 829.32