Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1275 ATGTCCGCGTCGTCCACTGCTTCCTTTTCACCGGACCAGAACCTCCTCTCTCCCTCCGACCAGCTCTGTTATGTCCATTGCGATTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCACCAGTTTGTTCAAGACTGTCACTGTGCGATGTGGTCATTGCACCAACCTTCTCTCTGTCAATATGCGAGGCCTGCTTCTTCCTTCTGCCAATCAGCTTCATCTCGGACACTCCTTCTTCACTCCCCAAAATCTTCTGGAGGAGATTCGAAGTGCACCTTCAACAAATATGGTAATGAATCAGCTACCGACTAGCCCAAATGATTCAGTGATGGCAATGAGTACCATGCGAGCGCGACCTGAGGAAATCCCTAAGCCTCCGCCGGCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAATCGCTTCATCAAGGATGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTCAGTGCTGCTGCAAAGAATTGGGCCCATTTCCCTCACATCCACTTCGGTCTGATGCCTGATCATCAACCCGTGAAGAAAGCCAATGTCCGCCAGGAAGGAGAGGAGGTGCTTATGAAAGATGGTTTTTTCGCTCCAGCAAACATTGGGGTCTCCCCATTTTAG 663 0.5008 MSASSTASFSPDQNLLSPSDQLCYVHCDFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPSANQLHLGHSFFTPQNLLEEIRSAPSTNMVMNQLPTSPNDSVMAMSTMRARPEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEEVLMKDGFFAPANIGVSPF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1275 220 Pfam YABBY protein 18 184 IPR006780 GO:0007275
Prci12g1275 220 SUPERFAMILY HMG-box 129 178 IPR036910 -
Prci12g1275 220 CDD HMG-box_SF 138 174 - -
Prci12g1275 220 MobiDBLite consensus disorder prediction 118 140 - -
Prci12g1275 220 Gene3D High mobility group box domain 123 181 IPR036910 -
Prci12g1275 220 FunFam Axial regulator YABBY 129 201 - -
Prci12g1275 220 PANTHER PROTEIN YABBY 6-RELATED 5 196 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1275 Prci-Chr12 26428219 26431458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1275 29 218 C2C2-YABBY Transcription Factor Family AT4G00180 63.333 4.24e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci12g1275 YABBY 1.6e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1275 K25796 - gmx:100781267 383.259