Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1272 ATGAGGAAGATTAGGGGATTCAAGCTTGGCCGACGCCTGATCCGAATCTCCAGATGGATCTTCCGGAGACCCCGATTCGGAGGATATCGGAGGTTGGGTTTGCATGATTCGCCGGCGACGAAGACCGTAGAGAAGATTATCAGCTGGGGGCGCAAGCTGACGAGAGGAGCCATATCCCTCTGCAACGTTAAGCCGGGGTCGGGATATATTCAGGTGGGATCCGACCCGGTACAGGACAAGCCTCCCGCAGTGCCGAAGGGTCACTTGGCGGTGTACGTCGGTCAGAAGGACGGTGAGTTTCACCGCGAGCTGGTGCCTGTGCTATACTTCAACCACCCCTTGTTCGGAGAGTTGCTGAGAGAGGCGGAGGAGGAATACGGGTACAACCATCCCGGCGGAATCACGATTCCGTGTCCATTCACCGAGTTTGAACGAGTCAAGACCCGAATAGCATCCAGGTCCGCTAGAGCCGGCCGGAGATTAGCGTGGAGATGA 495 0.5697 MRKIRGFKLGRRLIRISRWIFRRPRFGGYRRLGLHDSPATKTVEKIISWGRKLTRGAISLCNVKPGSGYIQVGSDPVQDKPPAVPKGHLAVYVGQKDGEFHRELVPVLYFNHPLFGELLREAEEEYGYNHPGGITIPCPFTEFERVKTRIASRSARAGRRLAWR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1272 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 65 145 IPR003676 GO:0009733
Prci12g1272 164 Pfam Auxin responsive protein 78 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1272 Prci-Chr12 26301157 26302253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1272 81 143 Calmodulin-binding Proteins AT3G43120 52.381 1.94e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1272 K14488 - pop:7497353 216.468