Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1262 ATGCTAATATTTCCAATGGCTGTTTTTCGCTCACTAGCGTTTCTTCTTCTTCCCTTTCTACTTCTCTATTATTGTGCTAATGGCTACACATTGGATGAAGTGAAACCATGGTGCAGCCAAACCCCAAACCCTCAACCATGTGAGTACTACTTCTTGACCTCCAAAACTTACAATAATAAACCCATCAAGCAAAATTCAGATTTCTTCAAACTTTCAGTCAACGTTGCTCTGGATAGGGCTAAAAAGGGCTTAACCAAGACTCGTTCGCTTGGTCCCAAGTGTAGAAATGCACGTGAGAAAGCTGCTTGGTCAGATTGCCTTGAGCTCTATGAGCTCACAATCAACAGGATCATCAAAACCATTAATCCTAATGCTGCAGAATGTACCCAAGTCGATGCTCAGACATGGCTCAGCACAGCTTTGACCAACCTTGAAACTTGCATGTTTGGGTTTTATGACCTTGGAGTTACAGAATATGTTCTGCCTTTGATGTCCGACAATGTTACTCAGTTGCTAAGTAATGCCTTGTCTCTTAACAAGGTTCCATACTCTGCACCGAGTTTCAACGACGATGGTTTCCCGTCGTGGGTTAAGCCACATGACCGGAAACTATTGCAGGCGGCGGCTTCTCCGGCTTCTCAAGCGAATGTCGTGGTGGCAACAGACGGTTCAGGGAATTACAAAACCGTGAAGGAGGCAGTAAATGCTGCACCAAAGAGTAACAAGGGAAGGTATGTCATACATGTGAAAGCTGGAGTGTACAATGAACAAGTTGAGGTAACAGGAAATAATATTATGTTGGTTGGAGATGGTATTAGGAAAACTATCATCACGGGTAGCAAAAGTGTTGGAGGAGGTACCACAACCTTCCGTTCAGCCACAGTTGCTGCTGTTGGAGATGGATTTATTGCCCGAGACATCACATTTAGAAATACAGCTGGACCATCAAACCACCAAGCAGTGGCATTCAGATCAGGATCAGATCTCTCAGTGTTTTATCGATGCAGCTTTGAGGGATATCAAGACACACTCTATGTCCATTCCGAGAGACAATTCTATAGAGAATGTGATATTTATGGCACAGTTGACTTCATCTTTGGTAACGCAGCTGTTATTTTGCAAAACTGCAATCTCTATGCAAGAACTCCTCCTCAAAAGACCATCACATTCACAGCTCAAGGTCGAACCGATCCGAATCAAAACTCTGGCATTATCATTCACAATTCTAAGGTTATAGGTTCATCGGACTTCAACTCTAACAACGTTAAGGCGTACCTTGGAAGGCCATGGAAGAAGTATTCTAGGACGGTTTTCATAAAGTGTTCTCTTGGAAGTTTGATTGACCCAGCAGGGTGGATGCAGTGGAGTGGTAATTTTGCTTTGGACACATTGTATTATGCTGAGTATGCAAACACAGGATCTGGTTCTTCCACTGCAAATAGGGTGAAGTGGAAGGGTTACCGAGTGATTGGTGCTTCTGAGGCCTCACAGTTCACTGTTAATCGCTTTCTTTCTGGAAGTTCATGGTTACCAGCCACTGGTGTGCCTTTCACTGCTGGTCTTTGA 1566 0.4374 MLIFPMAVFRSLAFLLLPFLLLYYCANGYTLDEVKPWCSQTPNPQPCEYYFLTSKTYNNKPIKQNSDFFKLSVNVALDRAKKGLTKTRSLGPKCRNAREKAAWSDCLELYELTINRIIKTINPNAAECTQVDAQTWLSTALTNLETCMFGFYDLGVTEYVLPLMSDNVTQLLSNALSLNKVPYSAPSFNDDGFPSWVKPHDRKLLQAAASPASQANVVVATDGSGNYKTVKEAVNAAPKSNKGRYVIHVKAGVYNEQVEVTGNNIMLVGDGIRKTIITGSKSVGGGTTTFRSATVAAVGDGFIARDITFRNTAGPSNHQAVAFRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVILQNCNLYARTPPQKTITFTAQGRTDPNQNSGIIIHNSKVIGSSDFNSNNVKAYLGRPWKKYSRTVFIKCSLGSLIDPAGWMQWSGNFALDTLYYAEYANTGSGSSTANRVKWKGYRVIGASEASQFTVNRFLSGSSWLPATGVPFTAGL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1262 521 Pfam Plant invertase/pectin methylesterase inhibitor 33 178 IPR006501 GO:0004857
Prci12g1262 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 182 IPR035513 -
Prci12g1262 521 Gene3D - 211 521 IPR012334 -
Prci12g1262 521 Pfam Pectinesterase 216 506 IPR000070 GO:0030599|GO:0042545
Prci12g1262 521 PANTHER PECTINESTERASE 20 511 - -
Prci12g1262 521 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Prci12g1262 521 ProSitePatterns Pectinesterase signature 1. 241 260 IPR018040 -
Prci12g1262 521 SMART PMEI_2 29 178 IPR006501 GO:0004857
Prci12g1262 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 181 IPR035513 -
Prci12g1262 521 SUPERFAMILY Pectin lyase-like 210 520 IPR011050 -
Prci12g1262 521 FunFam Pectinesterase 210 521 - -
Prci12g1262 521 NCBIfam pectinesterase inhibitor domain 14 181 IPR006501 GO:0004857
Prci12g1262 521 CDD PMEI-like_3 37 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1262 Prci-Chr12 26064782 26070382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1262 6 521 Carbohydrate Esterase AT2G45220 64.299 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1262 K01051 - gmx:100782892 746.503