Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1248 ATGAAGGCTGTGCCCCTACCCTTTGAGGAATTTCGAGGGAAAGGGGTTCTGGATTTTGGTTCTGCTGCTCCAGATTCGTTCTTGAAGTGGAATCATAATCACCATCATCATCACGACAATATTCTTCAAGAGCATTGCTATGTGGGCACTGAGCCCATCTCTGTTTTGAACGTCAGAAGAAACCCAAGCCCTCCGACTTCCTCCTCCACACTGTCTTCCTCACACGGCGGTGGCGGCAGCTGCAGCGGCGCCACCGGCTCCACTGACAGTTCCACGGGCGCAGCGAAGGTTTCCGGCGACAAGCCACATCCTCAGACGGCGTTAGACGCCGCTCTGCCGGCGGGGCTGGAAAGATGTGGGATAGGAATGGAGGACTGGGAGAGCGTCTTGTCTGAGTCGCCTGGTCAAGATCAGTCCATCCTGAGGATGATTATGGGTGACATTGAAGACCCATCTGTGGGATTGAGCAAGCTTTTGCAGGGTGGGACTGGTTCTCACCAAGATGTTGTCGATTTCAATGGCGGAGGAGGAGGCGGTTTCGGTGTTGTGGATCAAAGCTCTGTTCTTGACCATTTTTCTGGTGTTAATCTCGCAAGCAGCATTGACGCTTCTGGGAATTGTTCTGATTTTCCTTTTAATACCATCCACAACGTTAGCTTCAATAATAATATGGCGAGAGTTGGTTCATCTGTGAACCAAAACCCCATTTTCCCTTCGTCACCAACTTCGCTTCCTCCGGGAATGTTTCAGCCTCAGCAACACCAGCAAGCTATGGAGTCTCTGGACGAGAAGCCACAAATCCTCAATCCTCAGTTCATTGTTAACCCAAATCAAGCTCAGTTTATGCAGAATTCGTCGTTCGTTATGCCCTTGTCATATGAACATCAGCTTCTTCCTCAGCCTCCGGCAAAACGGCCTAATTGCGGTCCTATCAGACCAAATTACCAGGTTCTGAAGCCGCCATTTCTAGATCCTGGACAGGAGATATATCTCCGGCGGGGGCAGCAACCGCCGCCGCTTCAGTTGCTTCCTCATTATCATCATCATCATCATCTGCAGCAGCAACGGCAGGCATCTCCGGTGGCGGCGATGGCTCCGAAGCAGAGAATGGCGAGCCCTGGCGAAGAATTGGTGACCCACCAGCTTCAGCAGAGTGTTATGGACAAGCTGTTCAAGGCCACAGAGATGATCGAAACCGGTAATCCGGAACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCAACTGGGAAGCCTTTTCAAAGGGCTGCTTTTTACATGAAGGAGGCCTTGCAATCGCTTCTTTTCCATTTGGACAATTCCAACAGCGACAATTCTTTGACCTTCTCTCCTAGTGGCCTTGTCCTCAAGATTGGAGCTTGCAAATCGTTCTCAGAAATCTCACCAGTTCTCCAGTTCTCCAATTTCACTTGTAACCAAGCACTTCTTGAAGCTGTTGAAGGGTTTGATAGAATCCATGTAGTGGATTTTGACATTGGGGTTGGTGGACAGTGGGCTTCTTTCATGCAAGAGCTAGCTCTCAGAAATGGTGGTTCCCCTTCTCTGAAAATCACTGCCTTTGTTTCACCCTCTAATCACGACAACTTCGAGCTTGGTTTCACTCAAGAGATTCTGAAACAATATGCTTCTGATCTTAGCATTCCCTTCGAACTTGAGATTTTAGGACTCGAGTTATTGAACACTGCTTCCTGGCCACAACCACTTCGAGATTGTGAAGCCATTGCTGTAAGCTTGCCCATTGCTTCCTTCTCACATTGCCCATCATATCTCCCTCTGGTCCTCCGTTTTCTGAAGCAGCTCATGCCGAAAATTGTTGTCACTGTGGATAGACCTTGTGATCGAACTGATGCACCGTTTGCTCAACACTTGATTTACGCGCTTCAATCTTATTCAGTGCTTCTTGAGTCACTTGATGCTGTTAATATGAACCTTGATGTCCTTCAGATGATTGAGAAGTACCTTATTCAACCAGCAATGGAGAAGCTAGTCCTGGGTCGGCACAGGTTGCAATTGCGAGAAAGAACACCACAATGGAAAACCCTGCTACTAACATCTGGGTTTTCACCGTTGGCACTGAGTAACTTCACAGAATCTCAAGCGGAGTGTTTGGTTCAGAGGAATCCTGGAAGGGGATTTCACGTGGAGAAGAAGCAGTCTTCTCTTGTTCTTTACTGGCAGAGGAAGGAACTAATTTCAGTTTCAACATGGGGTTGCTAA 2247 0.4855 MKAVPLPFEEFRGKGVLDFGSAAPDSFLKWNHNHHHHHDNILQEHCYVGTEPISVLNVRRNPSPPTSSSTLSSSHGGGGSCSGATGSTDSSTGAAKVSGDKPHPQTALDAALPAGLERCGIGMEDWESVLSESPGQDQSILRMIMGDIEDPSVGLSKLLQGGTGSHQDVVDFNGGGGGGFGVVDQSSVLDHFSGVNLASSIDASGNCSDFPFNTIHNVSFNNNMARVGSSVNQNPIFPSSPTSLPPGMFQPQQHQQAMESLDEKPQILNPQFIVNPNQAQFMQNSSFVMPLSYEHQLLPQPPAKRPNCGPIRPNYQVLKPPFLDPGQEIYLRRGQQPPPLQLLPHYHHHHHLQQQRQASPVAAMAPKQRMASPGEELVTHQLQQSVMDKLFKATEMIETGNPELAQGILARLNHQLSPTGKPFQRAAFYMKEALQSLLFHLDNSNSDNSLTFSPSGLVLKIGACKSFSEISPVLQFSNFTCNQALLEAVEGFDRIHVVDFDIGVGGQWASFMQELALRNGGSPSLKITAFVSPSNHDNFELGFTQEILKQYASDLSIPFELEILGLELLNTASWPQPLRDCEAIAVSLPIASFSHCPSYLPLVLRFLKQLMPKIVVTVDRPCDRTDAPFAQHLIYALQSYSVLLESLDAVNMNLDVLQMIEKYLIQPAMEKLVLGRHRLQLRERTPQWKTLLLTSGFSPLALSNFTESQAECLVQRNPGRGFHVEKKQSSLVLYWQRKELISVSTWGC 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1248 748 MobiDBLite consensus disorder prediction 57 107 - -
Prci12g1248 748 ProSiteProfiles GRAS family profile. 377 747 IPR005202 -
Prci12g1248 748 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 354 743 IPR005202 -
Prci12g1248 748 MobiDBLite consensus disorder prediction 57 95 - -
Prci12g1248 748 Pfam GRAS domain family 388 746 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1248 Prci-Chr12 25295999 25299086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1248 346 748 GRAS Transcription Factor Family AT4G00150 54.815 1.34e-136 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci12g1248 GRAS 5.7e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1248 - - pcin:129288535 1403.65