Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1243 ATGGACAATCATGATCAATGTGATGTTTCTCTTGATGCCATGTTGCTAGTGAGTGGTCAACTTTACCTTGCAGTGTTAAATGCTGCCATTGAGCTCGACCTCTTCAAGATCATCGGTGAGGGAAACCCTAAGGGCATGTCACCCTCTGAAATTGCTTCCAAGCTTCCAAATGCACATGCTGACACCGTTCGCCGCCTTGATCGGTTGCTGTGTTTGCTTGCAAGTCATTCTGTTTTGACTTGTTCTTCCAGGAAGGTTGATGAAGATGGTAGAATTGAGAGGCTTTATGATCTATCTCCTACTGATAAATACATGTTCCCTGATGAGGATGGAGTCTCTTATGCTTCAGTCTCCAGATTAAGCTACCATCCAGCTTATATAAAAGTTCGGTAA 393 0.4351 MDNHDQCDVSLDAMLLVSGQLYLAVLNAAIELDLFKIIGEGNPKGMSPSEIASKLPNAHADTVRRLDRLLCLLASHSVLTCSSRKVDEDGRIERLYDLSPTDKYMFPDEDGVSYASVSRLSYHPAYIKVR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1243 130 Pfam Dimerisation domain 25 74 IPR012967 GO:0046983
Prci12g1243 130 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 14 130 IPR016461 GO:0008168
Prci12g1243 130 SUPERFAMILY "Winged helix" DNA-binding domain 10 110 IPR036390 -
Prci12g1243 130 PANTHER O-METHYLTRANSFERASE 17 111 IPR016461 GO:0008168
Prci12g1243 130 Gene3D - 1 105 IPR036388 -
Prci12g1243 130 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1243 Prci-Chr12 24705455 24705847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1243 8 117 Monolignol Biosynthesis Gene Families AT5G54160 48.649 4.43e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1243 K13066 - pcin:129289191 261.151